RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 SLC35G4P0C7Q5 338 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 PRSS56P0CW18 603 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 ATXN8OSP0DMR3 200 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 ZNF28P17035 718 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 MC4RP32245 332 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 XIAPP98170 497 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 SNX1Q13596 522 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 BRD3Q15059 726 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 PARP6Q2NL67 630 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 DEFB109BQ30KR1 87 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 ATP1A1-AS1Q5TC04 95 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 SEL1L2Q5TEA6 688 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 METRNLQ641Q3 311 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 FBXO38Q6PIJ6 1188 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 C6orf15Q6UXA7 325 aaPredicted RBP12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 CERS6Q6ZMG9 384 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 RBM12BQ8IXT5 1001 aaKnown RBP12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 SLC35F6Q8N357 371 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 PRELID2Q8N945 189 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 PHC3Q8NDX5 983 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 OR4E2Q8NGC2 313 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 FERD3LQ96RJ6 166 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 COPS8Q99627 209 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 MAP3K3Q99759 626 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 ZPBPQ9BS86 351 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 TRIM4Q9C037 500 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 HRASLS2Q9NWW9 162 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 JRKLQ9Y4A0 524 aa12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 MN1Q10571 1320 aaPredicted RBP12.04□□□□□ -0.48
CCDC85C-202ENST00000554877 IGHV5-51A0A0C4DH38 117 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 PRR19A6NJB7 356 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 CFAP99D6REC4 459 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 NRDCO43847 1150 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 ITGB2P05107 769 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 MTHFD1P11586 935 aaKnown RBP12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 ATP1B2P14415 290 aaPredicted RBP12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 POLR2CP19387 275 aaPredicted RBP12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 PSMA3P25788 255 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 CXCR5P32302 372 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 HADHAP40939 763 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 CAPZBP47756 277 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 PDE1BQ01064 536 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 CCNG2Q16589 344 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 CCDC38Q502W7 563 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 DNTTIP2Q5QJE6 756 aaKnown RBP12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 KLHL35Q6PF15 583 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 BORAQ6PGQ7 559 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 SNX20Q7Z614 316 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 PRUNE1Q86TP1 453 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 PTRH1Q86Y79 214 aaKnown RBP12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 DNAAF3Q8N9W5 541 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 OR2L2Q8NH16 312 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 DTX3LQ8TDB6 740 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 C1orf54Q8WWF1 131 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 ULK4Q96C45 1275 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 STAMBPL1Q96FJ0 436 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 ZNF514Q96K75 400 aaPredicted RBP12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 ZNF768Q9H5H4 540 aaKnown RBP12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 SMARCAL1Q9NZC9 954 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 ACSL5Q9ULC5 683 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 ZKSCAN5Q9Y2L8 839 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 RPS6KL1Q9Y6S9 549 aa12.03□□□□□ -0.48
CCDC85C-202ENST00000554877 OR51F1A6NGY5 319 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 PSMD3O43242 534 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 ZSCAN12O43309 604 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 LDB2O43679 373 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 SPAG6O75602 509 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 FGGP02679 453 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 NTRK1P04629 796 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 ANKRD34CP0C6C1 535 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 CCNYL3P0C7X3 344 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 EBLN1P0CF75 366 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 FOLR1P15328 257 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 TCN2P20062 427 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 STIP1P31948 543 aaKnown RBP12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 DLSTP36957 453 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 CCR10P46092 362 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 ZNF140P52738 457 aaPredicted RBP12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 DMPKQ09013 629 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 PRKG2Q13237 762 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 ERV3-1Q14264 604 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 CYP1B1Q16678 543 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 P3H1Q32P28 736 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 ZNF449Q6P9G9 518 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 PPP1R21Q6ZMI0 780 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 SERPINA9Q86WD7 417 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 PPP1R3BQ86XI6 285 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 NXPE1Q8N323 547 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 ESX1Q8N693 406 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 OR52K1Q8NGK4 314 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 PPM1MQ96MI6 270 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 PPP1R2P1Q96PQ5 205 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 NRTNQ99748 197 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 SPRY4Q9C004 299 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 TRIT1Q9H3H1 467 aaKnown RBP12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 LRRC40Q9H9A6 602 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 PDE7BQ9NP56 450 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 SOHLH2Q9NX45 425 aa12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 TRMT1Q9NXH9 659 aaKnown RBP12.02□□□□□ -0.49
CCDC85C-202ENST00000554877 SIDT1Q9NXL6 827 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms