RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TPI1P60174 286 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 GRIK4Q16099 956 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 BCL7AQ4VC05 210 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 CES5AQ6NT32 575 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 ZNF767PQ75MW2 155 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 B3GALNT2Q8NCR0 500 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 PJA1Q8NG27 643 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 ZFAND1Q8TCF1 268 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 TMEM125Q96AQ2 219 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 CCDC120Q96HB5 630 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 REXO5Q96IC2 774 aaKnown RBP15.44■□□□□ 0.06
SYNE3-203ENST00000554873 GPR78Q96P69 363 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 TRIM54Q9BYV2 358 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 EML4Q9HC35 981 aaKnown RBP15.44■□□□□ 0.06
SYNE3-203ENST00000554873 POLR3BQ9NW08 1133 aaPredicted RBP15.44■□□□□ 0.06
SYNE3-203ENST00000554873 ATPIF1Q9UII2 106 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 COL1A2P08123 1366 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 SLC9A3R1O14745 358 aaPredicted RBP15.44■□□□□ 0.06
SYNE3-203ENST00000554873 PCNAP12004 261 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 CAPN3P20807 821 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 YWHAQP27348 245 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 CLK1P49759 484 aaKnown RBP15.44■□□□□ 0.06
SYNE3-203ENST00000554873 YBX1P67809 324 aaKnown RBP15.44■□□□□ 0.06
SYNE3-203ENST00000554873 STK11Q15831 433 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 KIF19Q2TAC6 998 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 EML3Q32P44 896 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 ZNF772Q68DY9 489 aaPredicted RBP15.44■□□□□ 0.06
SYNE3-203ENST00000554873 PPTC7Q8NI37 304 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 LHFPL5Q8TAF8 219 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 ROGDIQ9GZN7 287 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 NXF2Q9GZY0 626 aaKnown RBP15.44■□□□□ 0.06
SYNE3-203ENST00000554873 LIN7BQ9HAP6 207 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 SNX6Q9UNH7 406 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 KCNH4Q9UQ05 1017 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 ACOT9Q9Y305 439 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 SNX10Q9Y5X0 201 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 SHROOM3Q8TF72 1996 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 SMIM28A0A1B0GU29 152 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 NCAM2O15394 837 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 ARHGEF9O43307 516 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 XPNPEP2O43895 674 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 PGK1P00558 417 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 PRLP01236 227 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 JCHAINP01591 159 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 LIPEQ05469 1076 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 KCNAB2Q13303 367 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 FAM214AQ32MH5 1076 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 ZNF691Q5VV52 312 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 LARP4Q71RC2 724 aaKnown RBP eCLIP15.44■□□□□ 0.06
SYNE3-203ENST00000554873 CEP97Q8IW35 865 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 MFSD6LQ8IWD5 586 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 TMEM199Q8N511 208 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 AMER2Q8N7J2 671 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 SH3KBP1Q96B97 665 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 TNIP3Q96KP6 325 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 KIFC1Q9BW19 673 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 POMKQ9H5K3 350 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 TRHDEQ9UKU6 1024 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 PCNTO95613 3336 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 PNMA8CA0A1B0GUJ8 204 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 ASB14A6NK59 587 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 A8MX80 341 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 G3V2T6 193 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 H3BMM5 538 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 KATNA1O75449 491 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 CD36P16671 472 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 NPR3P17342 541 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 ATF4P18848 351 aaPredicted RBP15.43■□□□□ 0.06
SYNE3-203ENST00000554873 CBLP22681 906 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 BDNFP23560 247 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 RYKP34925 604 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 TKTL1P51854 596 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 SOX4Q06945 474 aaPredicted RBP15.43■□□□□ 0.06
SYNE3-203ENST00000554873 LRRC26Q2I0M4 334 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 LIMS2Q7Z4I7 341 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 DENND6AQ8IWF6 608 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 TXNDC5Q8NBS9 432 aaKnown RBP15.43■□□□□ 0.06
SYNE3-203ENST00000554873 TMEM80Q96HE8 168 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 TEKT5Q96M29 485 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 FBRSL1Q9HCM7 1045 aaKnown RBP15.43■□□□□ 0.06
SYNE3-203ENST00000554873 RANGRFQ9HD47 186 aaPredicted RBP15.43■□□□□ 0.06
SYNE3-203ENST00000554873 RAPGEFL1Q9UHV5 662 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 LOC100130705A0A1B0GUX0 176 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 ATP6V1G2-DDX39BF2Z307 99 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 ERP29P30040 261 aaKnown RBP15.43■□□□□ 0.06
SYNE3-203ENST00000554873 SLC15A1P46059 708 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 MAP3K7CLP57077 242 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 DSTNP60981 165 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 MVKQ03426 396 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 CDH17Q12864 832 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 CDK5R2Q13319 367 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 CTBP1Q13363 440 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 UGT3A2Q3SY77 523 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 GPAT3Q53EU6 434 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 ZNF470Q6ECI4 717 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 TXNDC11Q6PKC3 985 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 DPY19L3Q6ZPD9 716 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 NRARPQ7Z6K4 114 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 CUZD1Q86UP6 607 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 PROSER1Q86XN7 944 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms