RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 DRICH1Q6PGQ1 229 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-213ENST00000554508 PCSK4Q6UW60 755 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 C4orf22Q6V702 233 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 NLRP9Q7RTR0 991 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 TAS2R42Q7RTR8 314 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 PRSS42Q7Z5A4 293 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 SERPINA9Q86WD7 417 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 CFAP206Q8IYR0 622 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 CACNA2D3Q8IZS8 1091 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 NLGN4XQ8N0W4 816 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 IL22RA1Q8N6P7 574 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 DNAAF3Q8N9W5 541 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 NLGN4YQ8NFZ3 816 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-213ENST00000554508 OR52K1Q8NGK4 314 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 GPR150Q8NGU9 434 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 HM13Q8TCT9 377 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 C1orf54Q8WWF1 131 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 ATG4AQ8WYN0 398 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 KLHL6Q8WZ60 621 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 UBXN4Q92575 508 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 RSC1A1Q92681 617 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 PMEPA1Q969W9 287 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 TGM7Q96PF1 710 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 INSM2Q96T92 566 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-213ENST00000554508 EFHD1Q9BUP0 239 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 WWP1Q9H0M0 922 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 ETNK1Q9HBU6 452 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 IMP3Q9NV31 184 aaKnown RBP8.53□□□□□ -1.04
ACTN1-213ENST00000554508 PAK5Q9P286 719 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 RIMKLBQ9ULI2 386 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 TMEM184BQ9Y519 407 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-213ENST00000554508 SPTBP11277 2137 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 CTAGE9A4FU28 777 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 E7EVH7 732 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 F8W8V4 182 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 CCL22O00626 93 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 RAD1O60671 282 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 AP2A2O94973 939 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 POLBP06746 335 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 ADRA1DP25100 572 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 NSG1P42857 185 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 LEPRP48357 1165 aaKnown RBP8.52□□□□□ -1.05
ACTN1-213ENST00000554508 CD151P48509 253 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 SEPHS1P49903 392 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 FOXM1Q08050 763 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 ABHD18Q0P651 414 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 RPA4Q13156 261 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 SEMA5AQ13591 1074 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 SNX1Q13596 522 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 COL9A2Q14055 689 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-213ENST00000554508 MAP7Q14244 749 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 KRT33BQ14525 404 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 ITIH4Q14624 930 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 PLCL1Q15111 1095 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 LYPLAL1Q5VWZ2 237 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 KIAA1614Q5VZ46 1190 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 CAPRIN2Q6IMN6 1127 aaKnown RBP8.52□□□□□ -1.05
ACTN1-213ENST00000554508 IRGCQ6NXR0 463 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 PPP1R21Q6ZMI0 780 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 VASH2Q86V25 355 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 BPHLQ86WA6 291 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-213ENST00000554508 KMT5CQ86Y97 462 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 CARFQ8N187 725 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 TAB3Q8N5C8 712 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-213ENST00000554508 CCDC89Q8N998 374 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 PEX13Q92968 403 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.52□□□□□ -1.051e-6■■■■■ 31.4
ACTN1-213ENST00000554508 PBKQ96KB5 322 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 C12orf66Q96MD2 445 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 RANBP9Q96S59 729 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 CD180Q99467 661 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 TTC1Q99614 292 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 NAPGQ99747 312 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-213ENST00000554508 CTRCQ99895 268 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 KIR3DX1Q9H7L2 352 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 APMAPQ9HDC9 416 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 RAB6BQ9NRW1 208 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 HOMER3Q9NSC5 361 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 SIDT1Q9NXL6 827 aaKnown RBP8.52□□□□□ -1.05
ACTN1-213ENST00000554508 PCDHGA4Q9Y5G9 962 aa8.52□□□□□ -1.05
ACTN1-213ENST00000554508 PCM1Q15154 2024 aa8.51□□□□□ -1.05
ACTN1-213ENST00000554508 ATMQ13315 3056 aa8.51□□□□□ -1.05
ACTN1-213ENST00000554508 OR5K3A6NET4 321 aa8.51□□□□□ -1.05
ACTN1-213ENST00000554508 AP3B1O00203 1094 aa8.51□□□□□ -1.05
ACTN1-213ENST00000554508 IFRD1O00458 451 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-213ENST00000554508 KIF1CO43896 1103 aaKnown RBP8.51□□□□□ -1.05
ACTN1-213ENST00000554508 STK17BO94768 372 aa8.51□□□□□ -1.05
ACTN1-213ENST00000554508 FGGP02679 453 aa8.51□□□□□ -1.05
ACTN1-213ENST00000554508 FGF5P12034 268 aa8.51□□□□□ -1.05
ACTN1-213ENST00000554508 NELFEP18615 380 aaKnown RBP8.51□□□□□ -1.05
ACTN1-213ENST00000554508 CASQ1P31415 396 aa8.51□□□□□ -1.05
ACTN1-213ENST00000554508 PPARGP37231 505 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-213ENST00000554508 CDKN1CP49918 316 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-213ENST00000554508 PLOD1Q02809 727 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-213ENST00000554508 SRSF6Q13247 344 aaKnown RBP8.51□□□□□ -1.05
ACTN1-213ENST00000554508 SIX1Q15475 284 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-213ENST00000554508 TSTD2Q5T7W7 516 aa8.51□□□□□ -1.05
ACTN1-213ENST00000554508 ARMC6Q6NXE6 501 aa8.51□□□□□ -1.05
ACTN1-213ENST00000554508 SYT10Q6XYQ8 523 aa8.51□□□□□ -1.05
ACTN1-213ENST00000554508 CERS6Q6ZMG9 384 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms