RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 MYRFLQ96LU7 910 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 KXD1Q9BQD3 176 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PAAF1Q9BRP4 392 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ARHGAP9Q9BRR9 750 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 FAM192AQ9GZU8 254 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 FOXP1Q9H334 677 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 LMAN1LQ9HAT1 526 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 KCNK13Q9HB14 408 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SYTL2Q9HCH5 934 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 GPRC5CQ9NQ84 441 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ASAH2Q9NR71 780 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 TDP1Q9NUW8 608 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CNIH4Q9P003 139 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PCDHA12Q9UN75 941 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 MAN2B2Q9Y2E5 1009 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 POLR3KQ9Y2Y1 108 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 MRPS2Q9Y399 296 aaKnown RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PCDHB4Q9Y5E5 795 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 DMRT1Q9Y5R6 373 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CLIC4Q9Y696 253 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CDY1Q9Y6F8 540 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 STYXL1Q9Y6J8 313 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 STON1Q9Y6Q2 735 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PMF1-BGLAPU3KQ54 211 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PTPRBP23467 1997 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 OR2AG2A6NM03 316 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 HEPACAM2A8MVW5 462 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 E9PAM4 449 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PSMD11O00231 422 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 C2CD2LO14523 706 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 TO15178 435 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SSX5O60225 188 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 NDUFS2O75306 463 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CIB2O75838 187 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 RHOBTB1O94844 696 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 METTL18O95568 372 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SERPINA3P01011 423 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 TP53P04637 393 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 FESP07332 822 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 KRT7P08729 469 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SNRPAP09012 282 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 TFPTP0C1Z6 253 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 MAPTP10636 758 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PRPS2P11908 318 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CEACAM1P13688 526 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 GJA1P17302 382 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 DRD1P21728 446 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 HNRNPA2B1P22626 353 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PTPN3P26045 913 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PTPN6P29350 595 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 LCN1P31025 176 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CAPZA2P47755 286 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 NPY4RP50391 375 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CLCNKBP51801 687 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PNLIPRP1P54315 467 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 NCKAP1LP55160 1127 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 RPS3AP61247 264 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SKP1P63208 163 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PDE1BQ01064 536 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ROR2Q01974 943 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SOX4Q06945 474 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 MYO1EQ12965 1108 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CTTNQ14247 550 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 IRF3Q14653 427 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 POLD3Q15054 466 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PDGFRLQ15198 375 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SEC23BQ15437 767 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 STILQ15468 1287 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 TRADDQ15628 312 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 FAM189A2Q15884 450 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CCDC142Q17RM4 750 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 MYLK3Q32MK0 819 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 EARS2Q5JPH6 523 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PAGE2BQ5JRK9 111 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 THEM4Q5T1C6 240 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ADGRF1Q5T601 910 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 GARNL3Q5VVW2 1013 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 E4F1Q66K89 784 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SIGIRRQ6IA17 410 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 NCAPH2Q6IBW4 605 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ARMC6Q6NXE6 501 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SYT13Q7L8C5 426 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 TMC3Q7Z5M5 1100 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PHLDB2Q86SQ0 1253 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 MON1AQ86VX9 555 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CDR2LQ86X02 465 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CLVS1Q8IUQ0 354 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 TMEFF1Q8IYR6 380 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ASCC1Q8N9N2 400 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 BPIFCQ8NFQ6 507 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 BBS10Q8TAM1 723 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ENKURQ8TC29 256 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ROBO4Q8WZ75 1007 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PMEPA1Q969W9 287 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 RSPRY1Q96DX4 576 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 C1GALT1C1Q96EU7 318 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CHMP6Q96FZ7 201 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF668Q96K58 619 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 EGLN2Q96KS0 407 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms