RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 PIK3CGP48736 1102 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 ISL1P61371 349 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 VAC14Q08AM6 782 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 SELPLGQ14242 412 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 BEND5Q7L4P6 421 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 P2RY8Q86VZ1 359 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 CFAP52Q8N1V2 620 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 TTC9BQ8N6N2 239 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 OR7G1Q8NGA0 311 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 L3HYPDHQ96EM0 354 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 BCL7BQ9BQE9 202 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 FEM1AQ9BSK4 669 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 ASPSCR1Q9BZE9 553 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 SLIRPQ9GZT3 109 aaKnown RBP16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 MIR1-1HGQ9H1L0 117 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 XIRP2A4UGR9 3374 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 AZIN1O14977 448 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 GRK4P32298 578 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 TGFBR1P36897 503 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 ACVRL1P37023 503 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 MAP2K4P45985 399 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 TIAL1Q01085 375 aaKnown RBP eCLIP16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 DGCR6Q14129 220 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 RSBN1Q5VWQ0 802 aaPredicted RBP16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 STEAP3Q658P3 488 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 PAQR3Q6TCH7 311 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 PGBD5Q8N414 524 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 SLC10A4Q96EP9 437 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 PNMA8BQ9ULN7 279 aaPredicted RBP16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 ISPDA4D126 451 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 IDH3BO43837 385 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 C1RP00736 705 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 HPRP00739 348 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 RAP2AP10114 183 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 NRG1Q02297 640 aaPredicted RBP16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 YWHAHQ04917 246 aaPredicted RBP16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 SULT1C3Q6IMI6 304 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 KDELC1Q6UW63 502 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 SCD5Q86SK9 330 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 DCP2Q8IU60 420 aaKnown RBP16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 HOMEZQ8IX15 550 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 ZNF300Q96RE9 604 aaPredicted RBP16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 RNF181Q9P0P0 153 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 GPR45Q9Y5Y3 372 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 SMIM35A0A1B0GVV1 85 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 A0A1W2PQ67 120 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 RAD51BO15315 384 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 HOXC11O43248 304 aaPredicted RBP16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 PARNO95453 639 aaKnown RBP16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 BMP1P13497 986 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 CD1DP15813 335 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 GRK3P35626 688 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 DESI1Q6ICB0 168 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 FAM86B1Q8N7N1 296 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 ITFG1Q8TB96 612 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 CNIH3Q8TBE1 160 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 YIPF6Q96EC8 236 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 RDH12Q96NR8 316 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 OSBPL10Q9BXB5 764 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 EPS8L2Q9H6S3 715 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 FAM105AQ9NUU6 356 aa16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 INTS6Q9UL03 887 aaKnown RBP16.69■□□□□ 0.26
PPP4R3A-202ENST00000554390 RRN3P2A6NIE6 340 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 IQCF5A8MTL0 148 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 CENPBD1B2RD01 187 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 MMP2P08253 660 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 DGKQP52824 942 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 ARPP19P56211 112 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 HERVK_113P63132 956 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 CHRNB3Q05901 458 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 EFEMP1Q12805 493 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 FAM98BQ52LJ0 330 aaKnown RBP16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 RAP1GAP2Q684P5 730 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 TMC5Q6UXY8 1006 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 AGMOQ6ZNB7 445 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 DTWD1Q8N5C7 304 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 MCOLN3Q8TDD5 553 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 SEMA3CQ99985 751 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 ERVK-6Q9BXR3 956 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 SP110Q9HB58 689 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 ERVK-18Q9QC07 812 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 MIA3Q5JRA6 1907 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 LOC100130705A0A1B0GUX0 176 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 MYADML2A6NDP7 307 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 NPEPPSL1A6NEC2 478 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 CCDC154A6NI56 674 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 CACNG3O60359 315 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 TULP3O75386 442 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 F2P00734 622 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 FGF4P08620 206 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 TRPC1P48995 793 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 RCAN2Q14206 197 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 MARC1Q5VT66 337 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 CCDC81Q6ZN84 652 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 ABI1Q8IZP0 508 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 CDYL2Q8N8U2 506 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 KLHDC9Q8NEP7 349 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 ATL1Q8WXF7 558 aa16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 RPL3LQ92901 407 aaKnown RBP16.68■□□□□ 0.26
PPP4R3A-202ENST00000554390 BPIFA1Q9NP55 256 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms