RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 IMP3Q9NV31 184 aaKnown RBP13.48□□□□□ -0.25
NUMB-209ENST00000554315 FAM8A1Q9UBU6 413 aa13.48□□□□□ -0.25
NUMB-209ENST00000554315 UTP11Q9Y3A2 253 aaKnown RBP13.48□□□□□ -0.25
NUMB-209ENST00000554315 PCDHB1Q9Y5F3 818 aa13.48□□□□□ -0.25
NUMB-209ENST00000554315 FAM169AQ9Y6X4 670 aa13.48□□□□□ -0.25
NUMB-209ENST00000554315 PTPRBP23467 1997 aa13.48□□□□□ -0.25
NUMB-209ENST00000554315 OR1I1O60431 355 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 UBXN7O94888 489 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 MTHFD1P11586 935 aaKnown RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 ARCN1P48444 511 aaKnown RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 LIMK2P53671 638 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 ARL4CP56559 192 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 CALCOCO2Q13137 446 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 LONRF1Q17RB8 773 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 HIBCHQ6NVY1 386 aaPredicted RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 IGF2-ASQ6U949 168 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 RAB11FIP2Q7L804 512 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 GSDMBQ8TAX9 411 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 ZNF592Q92610 1267 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 ZNF669Q96BR6 464 aaPredicted RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 EBNA1BP2Q99848 306 aaKnown RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 FOXP3Q9BZS1 431 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 MVB12BQ9H7P6 319 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 GNPTGQ9UJJ9 305 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 PRSS21Q9Y6M0 314 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 SPEGQ15772 3267 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 PLD2O14939 933 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 HGSO14964 777 aaPredicted RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 SEC31AO94979 1220 aaKnown RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 APOA4P06727 396 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 PGAM1P18669 254 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 OGNP20774 298 aaKnown RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 RPS3P23396 243 aaKnown RBP eCLIP13.47□□□□□ -0.25
NUMB-209ENST00000554315 ADARP55265 1226 aaKnown RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 GABREP78334 506 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 WHAMMP3Q1A5X7 153 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 SYTL3Q4VX76 610 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 ZNF761Q86XN6 746 aaPredicted RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 SLITRK4Q8IW52 837 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.47□□□□□ -0.25
NUMB-209ENST00000554315 ZCCHC14Q8WYQ9 949 aaKnown RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 ZDHHC12Q96GR4 267 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 ZNF578Q96N58 590 aaPredicted RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 FCRL3Q96P31 734 aaPredicted RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 FERD3LQ96RJ6 166 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 NUDT22Q9BRQ3 303 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 TBC1D10AQ9BXI6 508 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 TRIM31Q9BZY9 425 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 C20orf96Q9NUD7 363 aaPredicted RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 INTS10Q9NVR2 710 aaKnown RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 MARCH4Q9P2E8 410 aaPredicted RBP13.47□□□□□ -0.25
NUMB-209ENST00000554315 PDP2Q9P2J9 529 aa13.47□□□□□ -0.25
NUMB-209ENST00000554315 UNC13CQ8NB66 2214 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 IGHV5-10-1A0A0J9YXX1 117 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 UBA6A0AVT1 1052 aaPredicted RBP13.46□□□□□ -0.25
NUMB-209ENST00000554315 KDM1AO60341 852 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 DXOO77932 396 aaKnown RBP13.46□□□□□ -0.25
NUMB-209ENST00000554315 ESR1P03372 595 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 MPOP05164 745 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 JMJD7P0C870 316 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 ARNTP27540 789 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 CSTF2P33240 577 aaKnown RBP eCLIP13.46□□□□□ -0.25
NUMB-209ENST00000554315 MAPK9P45984 424 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 ITGA8P53708 1063 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 ERVPABLB-1P60509 514 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 GPR18Q14330 331 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 SEMA3AQ14563 771 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 PLCL1Q15111 1095 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 HIF1AQ16665 826 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 BBS9Q3SYG4 887 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 SPANXN3Q5MJ09 141 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 ZNF574Q6ZN55 896 aaPredicted RBP13.46□□□□□ -0.25
NUMB-209ENST00000554315 ZNF572Q7Z3I7 529 aaPredicted RBP13.46□□□□□ -0.25
NUMB-209ENST00000554315 LDB1Q86U70 411 aaPredicted RBP13.46□□□□□ -0.25
NUMB-209ENST00000554315 MNS1Q8NEH6 495 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 KIF18AQ8NI77 898 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 NAT14Q8WUY8 206 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 TFGQ92734 400 aaPredicted RBP13.46□□□□□ -0.25
NUMB-209ENST00000554315 FGF11Q92914 225 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 CCDC97Q96F63 343 aaPredicted RBP13.46□□□□□ -0.25
NUMB-209ENST00000554315 SLC46A1Q96NT5 459 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 RAB33BQ9H082 229 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 RAB17Q9H0T7 212 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 OR52A5Q9H2C5 316 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 SEMA6CQ9H3T2 930 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 THSD1Q9NS62 852 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 WHRNQ9P202 907 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 SATB2Q9UPW6 733 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 SNX24Q9Y343 169 aa13.46□□□□□ -0.25
NUMB-209ENST00000554315 ZNF106Q9H2Y7 1883 aaKnown RBP13.45□□□□□ -0.26
NUMB-209ENST00000554315 ZCWPW2A0A1B0GU75 182 aa13.45□□□□□ -0.26
NUMB-209ENST00000554315 TOX3O15405 576 aaPredicted RBP13.45□□□□□ -0.26
NUMB-209ENST00000554315 CAPNS1P04632 268 aa13.45□□□□□ -0.26
NUMB-209ENST00000554315 HOXB3P14651 431 aaPredicted RBP13.45□□□□□ -0.26
NUMB-209ENST00000554315 CAV1Q03135 178 aa13.45□□□□□ -0.26
NUMB-209ENST00000554315 DHX9Q08211 1270 aaKnown RBP13.45□□□□□ -0.26
NUMB-209ENST00000554315 TMED2Q15363 201 aa13.45□□□□□ -0.26
NUMB-209ENST00000554315 TYSND1Q2T9J0 566 aa13.45□□□□□ -0.26
NUMB-209ENST00000554315 ZNF658BQ4V348 819 aaPredicted RBP13.45□□□□□ -0.26
NUMB-209ENST00000554315 C3orf38Q5JPI3 329 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms