RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 ARMC9Q7Z3E5 817 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 SLC9B2Q86UD5 537 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 ADIPOR2Q86V24 386 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 SATL1Q86VE3 508 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 TDRD5Q8NAT2 981 aaKnown RBP3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 PAPD5Q8NDF8 572 aaKnown RBP3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 EXD1Q8NHP7 514 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 SMPDL3BQ92485 455 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 MRPS27Q92552 414 aaKnown RBP3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 HDAC11Q96DB2 347 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 ABHD8Q96I13 439 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 TTC14Q96N46 770 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 ZNF830Q96NB3 372 aaPredicted RBP3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 OR6C1Q96RD1 312 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 SLC22A12Q96S37 553 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 SEPHS2Q99611 448 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 TUBA1CQ9BQE3 449 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 POLR3CQ9BUI4 534 aaPredicted RBP3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 RETREG1Q9H6L5 497 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 ERVMER34-1Q9H9K5 563 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 EBF2Q9HAK2 575 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 PIH1D3Q9NQM4 214 aaKnown RBP3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 ABCF3Q9NUQ8 709 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 HAO2Q9NYQ3 351 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 IL17BQ9UHF5 180 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 ANAPC5Q9UJX4 755 aa3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 SPIN1Q9Y657 262 aaPredicted RBP3.48□□□□□ -1.85
EFCAB11-204ENST00000553871 MED19A0JLT2 244 aaPredicted RBP3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 A8MXE2 369 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 H7C0S8 307 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 TO15178 435 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 XRCC3O43542 346 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 LDB3O75112 727 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 MED24O75448 989 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 PDE9AO76083 593 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 FYNP06241 537 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 LIPFP07098 398 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 H1F0P07305 194 aaKnown RBP3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 SNRNP70P08621 437 aaKnown RBP3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 CCDC175P0C221 793 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 LINGO3P0C6S8 592 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 ERCC2P18074 760 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 PCGF2P35227 344 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 MTHFRP42898 656 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 RAB28P51157 221 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 RPS18P62269 152 aaKnown RBP3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 COASYQ13057 564 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 TNIP1Q15025 636 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 CRY2Q49AN0 593 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 ZNF628Q5EBL2 1059 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 KRBOX4Q5JUW0 171 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 SIRPB2Q5JXA9 342 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 PDSS1Q5T2R2 415 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 ARMC4Q5T2S8 1044 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 FAM109BQ6ICB4 259 aaPredicted RBP3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 CAPRIN2Q6IMN6 1127 aaKnown RBP3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 SPSB3Q6PJ21 355 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 DENND5BQ6ZUT9 1274 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 KCTD8Q6ZWB6 473 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 CCDC186Q7Z3E2 898 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 CENPVQ7Z7K6 275 aaPredicted RBP3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 EXOC3L1Q86VI1 746 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 PTOV1Q86YD1 416 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 METTL27Q8N6F8 245 aaPredicted RBP3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 PPFIBP2Q8ND30 876 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 OR2AJ1Q8NGZ0 328 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 LNX1Q8TBB1 728 aaPredicted RBP3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 TAS1R2Q8TE23 839 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 SPATA17Q96L03 361 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 DPAGT1Q9H3H5 408 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 SLA2Q9H6Q3 261 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 NOL11Q9H8H0 719 aaKnown RBP3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 ANKZF1Q9H8Y5 726 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 CNOT10Q9H9A5 744 aaKnown RBP3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 EQTNQ9NQ60 294 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 PFDN4Q9NQP4 134 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 WDR35Q9P2L0 1181 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 RHCGQ9UBD6 479 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 OSGIN1Q9UJX0 560 aa3.47□□□□□ -1.85
EFCAB11-204ENST00000553871 CKAP5Q14008 2032 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 EVPLQ92817 2033 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 ELOVL7A1L3X0 281 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 ASPDHA6ND91 283 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 ANKUB1A6NFN9 424 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 URADA6NGE7 173 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 TBX10O75333 385 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 TBCAO75347 108 aaKnown RBP3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 PPP1R3DO95685 299 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 LDLRP01130 860 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 TFAP2AP05549 437 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 CETPP11597 493 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 CSF2RAP15509 400 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 CKMT2P17540 419 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 GM2AP17900 193 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 DGKAP23743 735 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 TKTP29401 623 aaKnown RBP3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 ARCN1P48444 511 aaKnown RBP3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 SLC9A3P48764 834 aa3.46□□□□□ -1.86
EFCAB11-204ENST00000553871 FUT6P51993 359 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms