RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 UGT3A2Q3SY77 523 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 SPATS1Q496A3 300 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 C5orf22Q49AR2 442 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 RYBPQ8N488 228 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-207ENST00000553837 PDZD8Q8NEN9 1154 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 OR9I1Q8NGQ6 314 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 WBP2Q969T9 261 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 L3HYPDHQ96EM0 354 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 FUNDC2Q9BWH2 189 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 SLC7A5P2Q9GIP4 190 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 IRF2BPLQ9H1B7 796 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 ABCD2Q9UBJ2 740 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 GIMAP2Q9UG22 337 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 SRRDQ9UH36 339 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 DGKBQ9Y6T7 804 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 A0A1B0GTL3 188 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 MOXD2PA6NHM9 499 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 UBXN8O00124 270 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 NME4O00746 187 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 UGT2B11O75310 529 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 RPP40O75818 363 aaKnown RBP12.08□□□□□ -0.48
SHMT2-207ENST00000553837 SUPT7LO94864 414 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 KLKB1P03952 638 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 FGF1P05230 155 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 GALTP07902 379 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 HLA-DPA1P20036 260 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 ELK4P28324 431 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 MZF1P28698 734 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-207ENST00000553837 SERPINB1P30740 379 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 S100A5P33763 92 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 RFC2P35250 354 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 CDKN1CP49918 316 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-207ENST00000553837 STX1BP61266 288 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 SH3BP2P78314 561 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 IFITM3Q01628 133 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 ALG1LQ6GMV1 187 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 AKAP14Q86UN6 197 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 TBC1D21Q8IYX1 336 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 ABI1Q8IZP0 508 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 CRIPAKQ8N1N5 446 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 ZCCHC7Q8N3Z6 543 aaKnown RBP12.08□□□□□ -0.48
SHMT2-207ENST00000553837 MINDY1Q8N5J2 469 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 GPR150Q8NGU9 434 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 CD99L2Q8TCZ2 262 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 BRSK1Q8TDC3 778 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 FKBP10Q96AY3 582 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 CCDC126Q96EE4 140 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 CEP295NLQ96MC4 621 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 MUS81Q96NY9 551 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 NSUN5Q96P11 429 aaKnown RBP12.08□□□□□ -0.48
SHMT2-207ENST00000553837 ATP13A3Q9H7F0 1226 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 STARD7Q9NQZ5 370 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 THG1LQ9NWX6 298 aaKnown RBP12.08□□□□□ -0.48
SHMT2-207ENST00000553837 GMPR2Q9P2T1 348 aaKnown RBP12.08□□□□□ -0.48
SHMT2-207ENST00000553837 DNMT3BQ9UBC3 853 aaKnown RBP12.08□□□□□ -0.48
SHMT2-207ENST00000553837 EGFL7Q9UHF1 273 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 NDUFAF1Q9Y375 327 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 PCDHB7Q9Y5E2 793 aa12.08□□□□□ -0.48
SHMT2-207ENST00000553837 A0A0U1RQS6 177 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 F5H5T6 163 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 SLC22A1O15245 554 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 NUAK1O60285 661 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 ACSL4O60488 711 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 LDLRP01130 860 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 PRLP01236 227 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 ALDOCP09972 364 aaKnown RBP12.07□□□□□ -0.48
SHMT2-207ENST00000553837 UMPSP11172 480 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 GFAPP14136 432 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 SELPP16109 830 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 FOXA1P55317 472 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 CYP51A1Q16850 503 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 FBXO48Q5FWF7 155 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 LARP4Q71RC2 724 aaKnown RBP eCLIP12.07□□□□□ -0.487e-8■■□□□ 12.3
SHMT2-207ENST00000553837 PIWIL3Q7Z3Z3 882 aaKnown RBP12.07□□□□□ -0.48
SHMT2-207ENST00000553837 SLCO6A1Q86UG4 719 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 SLC22A9Q8IVM8 553 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 SPARTQ8N0X7 666 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 PIK3C3Q8NEB9 887 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 MDGA1Q8NFP4 955 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 OR4L1Q8NH43 312 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.07□□□□□ -0.48
SHMT2-207ENST00000553837 CDKN2AIPNLQ96HQ2 116 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 CYP2S1Q96SQ9 504 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 MGME1Q9BQP7 344 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 SPON2Q9BUD6 331 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 MUC13Q9H3R2 512 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 CPNE5Q9HCH3 593 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 SCUBE2Q9NQ36 999 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 HPS4Q9NQG7 708 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 GKN1Q9NS71 199 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 GALPQ9UBC7 116 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 ZNF639Q9UID6 485 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 ENPP5Q9UJA9 477 aa12.07□□□□□ -0.48
SHMT2-207ENST00000553837 PSMD11O00231 422 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 B4GAT1O43505 415 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 EPOP01588 193 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 KRT6AP02538 564 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 KRT6BP04259 564 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 SERPINF2P08697 491 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ZNF37AP17032 561 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms