RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 RHDQ02161 417 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 PLCL1Q15111 1095 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 P3H1Q32P28 736 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 PLXDC1Q8IUK5 500 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 IL22RA1Q8N6P7 574 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 LMNTD1Q8N9Z9 388 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 LKAAEAR1Q8TD35 194 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 DCUN1D1Q96GG9 259 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 RUFY1Q96T51 708 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 ZNF768Q9H5H4 540 aaKnown RBP17.79■□□□□ 0.44
SHMT2-206ENST00000553529 COG4Q9H9E3 785 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 AKIRIN1Q9H9L7 192 aaPredicted RBP17.79■□□□□ 0.44
SHMT2-206ENST00000553529 RAB6BQ9NRW1 208 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 ZDHHC3Q9NYG2 299 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 PCDHB11Q9Y5F2 797 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 TCRBV7S3A2A0A539 114 aa17.78■□□□□ 0.44
SHMT2-206ENST00000553529 NKX2-8O15522 239 aa17.78■□□□□ 0.44
SHMT2-206ENST00000553529 DLGAP3O95886 979 aa17.78■□□□□ 0.44
SHMT2-206ENST00000553529 ANKRD34CP0C6C1 535 aa17.78■□□□□ 0.44
SHMT2-206ENST00000553529 EBLN1P0CF75 366 aa17.78■□□□□ 0.44
SHMT2-206ENST00000553529 ITGB6P18564 788 aa17.78■□□□□ 0.44
SHMT2-206ENST00000553529 MSNP26038 577 aaKnown RBP17.78■□□□□ 0.44
SHMT2-206ENST00000553529 TRIP13Q15645 432 aaPredicted RBP17.78■□□□□ 0.44
SHMT2-206ENST00000553529 PRAMEF17Q5VTA0 474 aa17.78■□□□□ 0.44
SHMT2-206ENST00000553529 CAPRIN2Q6IMN6 1127 aaKnown RBP17.78■□□□□ 0.44
SHMT2-206ENST00000553529 LINC00615Q96LM1 132 aaPredicted RBP17.78■□□□□ 0.44
SHMT2-206ENST00000553529 SLC12A9Q9BXP2 914 aa17.78■□□□□ 0.44
SHMT2-206ENST00000553529 KLHL25Q9H0H3 589 aa17.78■□□□□ 0.44
SHMT2-206ENST00000553529 OR52A5Q9H2C5 316 aa17.78■□□□□ 0.44
SHMT2-206ENST00000553529 XKR8Q9H6D3 395 aa17.78■□□□□ 0.44
SHMT2-206ENST00000553529 SLC24A2Q9UI40 661 aa17.78■□□□□ 0.44
SHMT2-206ENST00000553529 OR6C74A6NCV1 312 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 POLR1CO15160 346 aaPredicted RBP17.77■□□□□ 0.44
SHMT2-206ENST00000553529 GOT2P00505 430 aaKnown RBP17.77■□□□□ 0.44
SHMT2-206ENST00000553529 CCDC175P0C221 793 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 PRKAR1AP10644 381 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 CD82P27701 267 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 KPNA2P52292 529 aaKnown RBP17.77■□□□□ 0.44
SHMT2-206ENST00000553529 CSE1LP55060 971 aaKnown RBP17.77■□□□□ 0.44
SHMT2-206ENST00000553529 TBR1Q16650 682 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 PPP1R21Q6ZMI0 780 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 ZNF534Q76KX8 674 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 PRSS42Q7Z5A4 293 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 TXLNBQ8N3L3 684 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 DNAAF3Q8N9W5 541 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 GALNT6Q8NCL4 622 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 CCDC112Q8NEF3 446 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 OR4E2Q8NGC2 313 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 HDAC10Q969S8 669 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 ULK4Q96C45 1275 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 MS4A14Q96JA4 679 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 TRIM56Q9BRZ2 755 aaKnown RBP17.77■□□□□ 0.44
SHMT2-206ENST00000553529 FBXO8Q9NRD0 319 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 CIDEBQ9UHD4 219 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 PPP2R2CQ9Y2T4 447 aa17.77■□□□□ 0.44
SHMT2-206ENST00000553529 DNMT3AQ9Y6K1 912 aaPredicted RBP17.77■□□□□ 0.44
SHMT2-206ENST00000553529 OR5K3A6NET4 321 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 GOLGA6L6A8MZA4 724 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 H7C0S8 307 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 BTN3A3O00478 584 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 KIAA0754O94854 1291 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 FGGP02679 453 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 SLC35G4P0C7Q5 338 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 POLR2CP19387 275 aaPredicted RBP17.76■□□□□ 0.43
SHMT2-206ENST00000553529 HADHAP40939 763 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 RAB15P59190 212 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 PRKG2Q13237 762 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 SEMA5AQ13591 1074 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 GSE1Q14687 1217 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 NLGN4XQ8N0W4 816 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 NLGN4YQ8NFZ3 816 aaPredicted RBP17.76■□□□□ 0.43
SHMT2-206ENST00000553529 HM13Q8TCT9 377 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 STYXQ8WUJ0 223 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 KLHL6Q8WZ60 621 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 HGH1Q9BTY7 390 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 ULBP3Q9BZM4 244 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 EPB41L1Q9H4G0 881 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 CASS4Q9NQ75 786 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 HRASLS2Q9NWW9 162 aa17.76■□□□□ 0.43
SHMT2-206ENST00000553529 MARCH4Q9P2E8 410 aaPredicted RBP17.76■□□□□ 0.43
SHMT2-206ENST00000553529 FEZ2Q9UHY8 353 aaPredicted RBP17.76■□□□□ 0.43
SHMT2-206ENST00000553529 TTC7AQ9ULT0 858 aaPredicted RBP17.76■□□□□ 0.43
SHMT2-206ENST00000553529 IQCF5A8MTL0 148 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 CEP104O60308 925 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 SUN1O94901 812 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 APRTP07741 180 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 TPBGLP0DKB5 382 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 PVRP15151 417 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 LMAN1P49257 510 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 ATP1A2P50993 1020 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 SESN2P58004 480 aaPredicted RBP17.75■□□□□ 0.43
SHMT2-206ENST00000553529 CACNG1Q06432 222 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 CDH17Q12864 832 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 GPR19Q15760 415 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 TSTD2Q5T7W7 516 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 TTC27Q6P3X3 843 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 CES3Q6UWW8 571 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 CEACAM20Q6UY09 585 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 TMEM135Q86UB9 458 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 AVL9Q8NBF6 648 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms