RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ELP6Q0PNE2 266 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 CYLC2Q14093 348 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-221ENST00000553498 TGFBIQ15582 683 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 TSNQ15631 228 aaKnown RBP7.2□□□□□ -1.26
ATXN3-221ENST00000553498 CHRNA6Q15825 494 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 PDCD2Q16342 344 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-221ENST00000553498 GSTA3Q16772 222 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 SMU1Q2TAY7 513 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 ZNF284Q2VY69 593 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 UGT3A2Q3SY77 523 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 SPATS1Q496A3 300 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 COQ5Q5HYK3 327 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 LDLRAP1Q5SW96 308 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 PLEKHS1Q5SXH7 462 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 NXNQ6DKJ4 435 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 SULT1C3Q6IMI6 304 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 OGFOD2Q6N063 350 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 AAGABQ6PD74 315 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 HACD2Q6Y1H2 254 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 LARP4Q71RC2 724 aaKnown RBP eCLIP7.2□□□□□ -1.26
ATXN3-221ENST00000553498 ZNF765Q7L2R6 523 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 SPATA19Q7Z5L4 167 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 ZSWIM9Q86XI8 627 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 SCUBE1Q8IWY4 988 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 CPA6Q8N4T0 437 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 KYQ8NBH2 561 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 GPR26Q8NDV2 337 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 TET1Q8NFU7 2136 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 OR6K2Q8NGY2 324 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 RIN3Q8TB24 985 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 MAPK15Q8TD08 544 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 AGAP11Q8TF27 550 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 UBTD2Q8WUN7 234 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 EEF1AKMT1Q8WVE0 214 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 STMN2Q93045 179 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 RAB7BQ96AH8 199 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 C19orf60Q96EN9 201 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 DCUN1D1Q96GG9 259 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 PRR11Q96HE9 360 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-221ENST00000553498 ZSWIM3Q96MP5 696 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 KLHL32Q96NJ5 620 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 TACO1Q9BSH4 297 aaKnown RBP7.2□□□□□ -1.26
ATXN3-221ENST00000553498 TRIM54Q9BYV2 358 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 FAM83DQ9H4H8 585 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 EPHX3Q9H6B9 360 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 WDR55Q9H6Y2 383 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-221ENST00000553498 RIC8BQ9NVN3 520 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 NOP53Q9NZM5 478 aaKnown RBP7.2□□□□□ -1.26
ATXN3-221ENST00000553498 CD274Q9NZQ7 290 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 STOML1Q9UBI4 398 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 B4GALT6Q9UBX8 382 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 SLCO3A1Q9UIG8 710 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 KIAA1671Q9BY89 1806 aa7.2□□□□□ -1.26
ATXN3-221ENST00000553498 GREB1Q4ZG55 1949 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 DYTNA2CJ06 578 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 PSMD12O00232 456 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-221ENST00000553498 CDC7O00311 574 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 UBFD1O14562 309 aaKnown RBP7.19□□□□□ -1.26
ATXN3-221ENST00000553498 PER2O15055 1255 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 FFAR2O15552 330 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 TULP3O75386 442 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 KATNA1O75449 491 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 SLC25A14O95258 325 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-221ENST00000553498 MATN4O95460 622 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 OTCP00480 354 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 FTH1P02794 183 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 ITGB2P05107 769 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 PRSS56P0CW18 603 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 IDO1P14902 403 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 LHCGRP22888 699 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 ITGB7P26010 798 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 COL8A1P27658 744 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 EEF1DP29692 281 aaKnown RBP7.19□□□□□ -1.26
ATXN3-221ENST00000553498 HNMTP50135 292 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 PGGT1BP53609 377 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 AP1S2P56377 157 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 ACTR3P61158 418 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 NTHL1P78549 312 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 PLOD1Q02809 727 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-221ENST00000553498 ZNF33BQ06732 778 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 FCHO2Q0JRZ9 810 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 GBX1Q14549 363 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 ELAVL3Q14576 367 aaKnown RBP7.19□□□□□ -1.26
ATXN3-221ENST00000553498 PPP1R3AQ16821 1122 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 GEN1Q17RS7 908 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 HNRNPA1L2Q32P51 320 aaKnown RBP7.19□□□□□ -1.26
ATXN3-221ENST00000553498 FAM78AQ5JUQ0 283 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 PGM2L1Q6PCE3 622 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 GALNT13Q8IUC8 556 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 CPNE9Q8IYJ1 553 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 ULK2Q8IYT8 1036 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 PGAM4Q8N0Y7 254 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 DDHD1Q8NEL9 900 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 GIMAP7Q8NHV1 300 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 ITFG1Q8TB96 612 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 AGR3Q8TD06 166 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 ASZ1Q8WWH4 475 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 OR8D1Q8WZ84 308 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 FGF13Q92913 245 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 MRPL38Q96DV4 380 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms