RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CWC15Q9P013 229 aaKnown RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 CNOT8Q9UFF9 292 aaKnown RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 LNPEPQ9UIQ6 1025 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 SIK3Q9Y2K2 1263 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 SLC30A1Q9Y6M5 507 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 MED13LQ71F56 2210 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 PIPSLA2A3N6 862 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 OR5K4A6NMS3 321 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 MAFKO60675 156 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 SPAG6O75602 509 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 EEF1GP26641 437 aaKnown RBP7.15□□□□□ -1.26
ATXN3-219ENST00000553488 NOP2P46087 812 aaKnown RBP7.15□□□□□ -1.26
ATXN3-219ENST00000553488 HCAR3P49019 387 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 SEPHS1P49903 392 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 CAMK4Q16566 473 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 IFI16Q16666 785 aaKnown RBP7.15□□□□□ -1.26
ATXN3-219ENST00000553488 TPD52L1Q16890 204 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-219ENST00000553488 TSNAXIP1Q2TAA8 658 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 EIF2S3LQ2VIR3 472 aaKnown RBP7.15□□□□□ -1.26
ATXN3-219ENST00000553488 TCP11X2Q5H9J9 407 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 PPP6R3Q5H9R7 873 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-219ENST00000553488 ERMARDQ5T6L9 678 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 JMJD6Q6NYC1 403 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-219ENST00000553488 PPP1R3BQ86XI6 285 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 RASGRP3Q8IV61 690 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 RAVER1Q8IY67 606 aaKnown RBP7.15□□□□□ -1.26
ATXN3-219ENST00000553488 MCOLN2Q8IZK6 566 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 AVL9Q8NBF6 648 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 EXD1Q8NHP7 514 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 ADAMTS17Q8TE56 1095 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 THAP4Q8WY91 577 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 KLHL6Q8WZ60 621 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 ELMO2Q96JJ3 720 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 TGM7Q96PF1 710 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 LYSMD1Q96S90 227 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 SYT11Q9BT88 431 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 SLC25A23Q9BV35 468 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 TDRD1Q9BXT4 1180 aaKnown RBP7.15□□□□□ -1.26
ATXN3-219ENST00000553488 TRIM7Q9C029 511 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 RMI1Q9H9A7 625 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 FAM207AQ9NSI2 230 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-219ENST00000553488 TAS2R14Q9NYV8 317 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 LUZP4Q9P127 313 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 SEMA5BQ9P283 1151 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 ZNF624Q9P2J8 865 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-219ENST00000553488 PCSK1NQ9UHG2 260 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 ZNHIT2Q9UHR6 403 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 PADI1Q9ULC6 663 aa7.15□□□□□ -1.26
ATXN3-219ENST00000553488 SNRNP200O75643 2136 aaKnown RBP7.15□□□□□ -1.27
ATXN3-219ENST00000553488 ANKRD62A6NC57 917 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 ARGFXA6NJG6 315 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 PES1O00541 588 aaKnown RBP7.14□□□□□ -1.27
ATXN3-219ENST00000553488 NUAK1O60285 661 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 SNX2O60749 519 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 LRCH4O75427 683 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 KRT38O76015 456 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 UBXN7O94888 489 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 ASMTLO95671 621 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 PRLP01236 227 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 MT-ND3P03897 115 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 BRAFP15056 766 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 TYRP1P17643 537 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 NELFEP18615 380 aaKnown RBP7.14□□□□□ -1.27
ATXN3-219ENST00000553488 XRCC1P18887 633 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-219ENST00000553488 PSMA2P25787 234 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 PTPN4P29074 926 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 MIPP30301 263 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 MMP13P45452 471 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 ZNF135P52742 658 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-219ENST00000553488 PPP1CAP62136 330 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 MAMLD1Q13495 774 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 CHRNA6Q15825 494 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 DPYSL2Q16555 572 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 NKPD1Q17RQ9 610 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 SLC6A19Q695T7 634 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 PLEKHA7Q6IQ23 1121 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 PWWP2BQ6NUJ5 590 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 DCUN1D2Q6PH85 259 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 ZNF517Q6ZMY9 492 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-219ENST00000553488 C22orf34Q6ZV56 151 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 SYVN1Q86TM6 617 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 PHYKPLQ8IUZ5 450 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 PSTKQ8IV42 348 aaKnown RBP7.14□□□□□ -1.27
ATXN3-219ENST00000553488 ATPAF2Q8N5M1 289 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 TEX26Q8N6G2 289 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 AOPEPQ8N6M6 819 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 RBMXL3Q8N7X1 1067 aaKnown RBP7.14□□□□□ -1.27
ATXN3-219ENST00000553488 SEC14L1Q92503 715 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 PNPLA2Q96AD5 504 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 SLC41A2Q96JW4 573 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 PCNX1Q96RV3 2341 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 AGPAT1Q99943 283 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 KRTAP9-2Q9BYQ4 174 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 SLC29A3Q9BZD2 475 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 ING2Q9H160 280 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 CARD9Q9H257 536 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 ATXN10Q9UBB4 475 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 EPHA6Q9UF33 1036 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 SLC5A6Q9Y289 635 aa7.14□□□□□ -1.27
ATXN3-219ENST00000553488 PCDHGB7Q9Y5F8 929 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms