RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 NDNFQ8TB73 568 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 PGAP3Q96FM1 320 aaPredicted RBP12.19□□□□□ -0.46
HDAC7-230ENST00000552960 CFHR5Q9BXR6 569 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 RNF208Q9H0X6 261 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 MRM3Q9HC36 420 aaKnown RBP12.19□□□□□ -0.46
HDAC7-230ENST00000552960 FAM118AQ9NWS6 357 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 POU2F3Q9UKI9 436 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 H0YAE9 185 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 SCAMP3O14828 347 aaKnown RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 SLC7A4O43246 635 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 NDUFS2O75306 463 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 ECI2O75521 394 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 CAPN15O75808 1086 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 MYO1DO94832 1006 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 ANXA6P08133 673 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 CDH1P12830 882 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 RPL9P32969 192 aaKnown RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 MAP2K4P45985 399 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 RENBPP51606 427 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 SIM2Q14190 667 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 IHHQ14623 411 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 NR6A1Q15406 480 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 RBM23Q86U06 439 aaKnown RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 CIR1Q86X95 450 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 Q8N9G6 341 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 SLAIN1Q8ND83 568 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 STAG3L4Q8TBR4 150 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 FAM162AQ96A26 154 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 MAGED4Q96JG8 741 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 PKMYT1Q99640 499 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 GPR62Q9BZJ7 368 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 MIR1-1HGQ9H1L0 117 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 PALMDQ9NP74 551 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 ABCB10Q9NRK6 738 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 AIG1Q9NVV5 245 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 COMMD8Q9NX08 183 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 ABI2Q9NYB9 513 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 CD274Q9NZQ7 290 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 ADGRE2Q9UHX3 823 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 EIF2B4Q9UI10 523 aaKnown RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 IKZF3Q9UKT9 509 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 MIA3Q5JRA6 1907 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 SPTBN5Q9NRC6 3674 aaKnown RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 RAP2AP10114 183 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 FMO3P31513 532 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 CYP2C18P33260 490 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 GRIK1P39086 918 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 SEPHS1P49903 392 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 EEFSECP57772 596 aaKnown RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 IFITM3Q01628 133 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 SLC13A2Q13183 592 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 GTF2IRD2BQ6EKJ0 949 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 IL27RAQ6UWB1 636 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 TAS1R1Q7RTX1 841 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 GTF2IRD2Q86UP8 949 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 PROSER1Q86XN7 944 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 HID1Q8IV36 788 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 CHDHQ8NE62 594 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 ASB2Q96Q27 587 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 CYP2S1Q96SQ9 504 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 SEMA3CQ99985 751 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 MFSD1Q9H3U5 465 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 GPN2Q9H9Y4 310 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 SIAEQ9HAT2 523 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 ZMYM5Q9UJ78 669 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 CDH9Q9ULB4 789 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 TDRD15B5MCY1 1934 aaKnown RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 IRAK2O43187 625 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 HTR1AP08908 422 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 GSTM2P28161 218 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 TSPY1Q01534 308 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 OXA1LQ15070 435 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 MAPRE1Q15691 268 aaKnown RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 SGO1Q5FBB7 561 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 IRAK1BP1Q5VVH5 260 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 RSPO2Q6UXX9 243 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 MILR1Q7Z6M3 343 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 TMEM86AQ8N2M4 240 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 ATAD1Q8NBU5 361 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 LEMD2Q8NC56 503 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 PDPRQ8NCN5 879 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 OR52B6Q8NGF0 335 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 GPR21Q99679 349 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 AMBRA1Q9C0C7 1298 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 CARS2Q9HA77 564 aaKnown RBP12.18□□□□□ -0.46
HDAC7-230ENST00000552960 C8orf4Q9NR00 106 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 ATP11BQ9Y2G3 1177 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 HS3ST4Q9Y661 456 aa12.18□□□□□ -0.46
HDAC7-230ENST00000552960 M0QZQ0 153 aa12.17□□□□□ -0.46
HDAC7-230ENST00000552960 G6PDP11413 515 aa12.17□□□□□ -0.46
HDAC7-230ENST00000552960 TGFBR1P36897 503 aa12.17□□□□□ -0.46
HDAC7-230ENST00000552960 FOXM1Q08050 763 aa12.17□□□□□ -0.46
HDAC7-230ENST00000552960 C6orf136Q5SQH8 315 aa12.17□□□□□ -0.46
HDAC7-230ENST00000552960 FAM171BQ6P995 826 aa12.17□□□□□ -0.46
HDAC7-230ENST00000552960 PAGE2Q7Z2X7 111 aa12.17□□□□□ -0.46
HDAC7-230ENST00000552960 SLC22A16Q86VW1 577 aa12.17□□□□□ -0.46
HDAC7-230ENST00000552960 PTRH1Q86Y79 214 aaKnown RBP12.17□□□□□ -0.46
HDAC7-230ENST00000552960 METTL6Q8TCB7 284 aa12.17□□□□□ -0.46
HDAC7-230ENST00000552960 PROKR1Q8TCW9 393 aa12.17□□□□□ -0.46
HDAC7-230ENST00000552960 RORBQ92753 470 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms