RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 PDIA2Q13087 525 aaKnown RBP13.44□□□□□ -0.26
TROAP-213ENST00000550709 CTBP1Q13363 440 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 CAMK2BQ13554 666 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 GPR18Q14330 331 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 CRYMQ14894 314 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 TRADDQ15628 312 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 SYTL3Q4VX76 610 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 HSP90AA5PQ58FG0 334 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 PHF19Q5T6S3 580 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 C8orf74Q6P047 294 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 ZNF449Q6P9G9 518 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 FOXR1Q6PIV2 292 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 DENND6AQ8IWF6 608 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 BBOF1Q8ND07 529 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 MNS1Q8NEH6 495 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 GPR150Q8NGU9 434 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 NCSTNQ92542 709 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 GATA6Q92908 595 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 FAM136AQ96C01 138 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 LRRC1Q9BTT6 524 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.44□□□□□ -0.26
TROAP-213ENST00000550709 EPB41L5Q9HCM4 733 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 SLC40A1Q9NP59 571 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 IARS2Q9NSE4 1012 aaKnown RBP13.44□□□□□ -0.26
TROAP-213ENST00000550709 POT1Q9NUX5 634 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 WHRNQ9P202 907 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 ZC3H7BQ9UGR2 993 aaKnown RBP13.44□□□□□ -0.26
TROAP-213ENST00000550709 CRYL1Q9Y2S2 319 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 ENTPD2Q9Y5L3 495 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 FAM169AQ9Y6X4 670 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 TPRP12270 2363 aaKnown RBP13.44□□□□□ -0.26
TROAP-213ENST00000550709 ARHGEF17Q96PE2 2063 aaPredicted RBP13.43□□□□□ -0.26
TROAP-213ENST00000550709 IFRD1O00458 451 aaPredicted RBP13.43□□□□□ -0.26
TROAP-213ENST00000550709 NDC80O14777 642 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 PFDN6O15212 129 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 CPNE6O95741 557 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 TTC4O95801 387 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 MPOP05164 745 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 GSTM1P09488 218 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 AMD1P17707 334 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 CCR7P32248 378 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 CSF2RBP32927 897 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 PDX1P52945 283 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 PLTPP55058 493 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 INHBCP55103 352 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 RP1P56715 2156 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 GSTM4Q03013 218 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 CFHR1Q03591 330 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 HSPA14Q0VDF9 509 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 TUBB2AQ13885 445 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 FASTKD3Q14CZ7 662 aaKnown RBP13.43□□□□□ -0.26
TROAP-213ENST00000550709 TYSND1Q2T9J0 566 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 ZNF658BQ4V348 819 aaPredicted RBP13.43□□□□□ -0.26
TROAP-213ENST00000550709 ZNF789Q5FWF6 425 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 SNAP47Q5SQN1 464 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 CAPRIN2Q6IMN6 1127 aaKnown RBP13.43□□□□□ -0.26
TROAP-213ENST00000550709 UNQ6494/PRO21346Q6UXR6 183 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 CENPUQ71F23 418 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 KCNMB4Q86W47 210 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 CILP2Q8IUL8 1156 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 CACTIN-AS1Q8N1I8 211 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 PHC3Q8NDX5 983 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 LPGAT1Q92604 370 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 TCF12Q99081 682 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 WDR83Q9BRX9 315 aaKnown RBP13.43□□□□□ -0.26
TROAP-213ENST00000550709 NAT9Q9BTE0 207 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 TUBB2BQ9BVA1 445 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 TSSK1BQ9BXA7 367 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 RAB17Q9H0T7 212 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 P2RY12Q9H244 342 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 OR52A5Q9H2C5 316 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 SEMA6CQ9H3T2 930 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 PPANQ9NQ55 473 aaKnown RBP13.43□□□□□ -0.26
TROAP-213ENST00000550709 FBXO6Q9NRD1 293 aaPredicted RBP13.43□□□□□ -0.26
TROAP-213ENST00000550709 GRHL1Q9NZI5 618 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 TMEM9Q9P0T7 183 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 GNPTGQ9UJJ9 305 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 AK5Q9Y6K8 562 aa13.43□□□□□ -0.26
TROAP-213ENST00000550709 ESYT3A0FGR9 886 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 PMS2P1A4D2B8 440 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 CTAGE15A4D2H0 777 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 LILRA5A6NI73 299 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 LIN7AO14910 233 aaPredicted RBP13.42□□□□□ -0.26
TROAP-213ENST00000550709 DUX1O43812 170 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 UBXN7O94888 489 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 S1PR4O95977 384 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 PROS1P07225 676 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 CTAGE8P0CG41 777 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 OGNP20774 298 aaKnown RBP13.42□□□□□ -0.26
TROAP-213ENST00000550709 RPS3P23396 243 aaKnown RBP eCLIP13.42□□□□□ -0.26
TROAP-213ENST00000550709 SLC1A2P43004 574 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 GPLD1P80108 840 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 CYP4F3Q08477 520 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 RPA4Q13156 261 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 PLCL1Q15111 1095 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 C3orf38Q5JPI3 329 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 SPANXN3Q5MJ09 141 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 CTSL3PQ5NE16 218 aa13.42□□□□□ -0.26
TROAP-213ENST00000550709 RNF187Q5TA31 235 aaPredicted RBP13.42□□□□□ -0.26
TROAP-213ENST00000550709 UNC5AQ6ZN44 842 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms