RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 IGKV2-30P06310 120 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 S1PR1P21453 382 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 KCNA5P22460 613 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 EEF1DP29692 281 aaKnown RBP4.78□□□□□ -1.64
LIMA1-205ENST00000550592 PEX5P50542 639 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 LINC00205P59089 165 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 MYBPHQ13203 477 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 SNTB1Q13884 538 aaKnown RBP4.78□□□□□ -1.64
LIMA1-205ENST00000550592 HLFQ16534 295 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 FAM98BQ52LJ0 330 aaKnown RBP4.78□□□□□ -1.64
LIMA1-205ENST00000550592 TCP11X2Q5H9J9 407 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 ZDHHC20Q5W0Z9 365 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 FAM109BQ6ICB4 259 aaPredicted RBP4.78□□□□□ -1.64
LIMA1-205ENST00000550592 RHBDF2Q6PJF5 856 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 ZNF534Q76KX8 674 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 HAUS6Q7Z4H7 955 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 PM20D2Q8IYS1 436 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 FBXL14Q8N1E6 418 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 IQCF1Q8N6M8 205 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 SPATA22Q8NHS9 363 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 TAS1R2Q8TE23 839 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 UTP15Q8TED0 518 aaKnown RBP4.78□□□□□ -1.64
LIMA1-205ENST00000550592 LPGAT1Q92604 370 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 QRFPRQ96P65 431 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 OR1F2PQ96R84 312 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 PCYT2Q99447 389 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 HGH1Q9BTY7 390 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 AP1M1Q9BXS5 423 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 TMEM30AQ9NV96 361 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 SMARCAL1Q9NZC9 954 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 RCC2Q9P258 522 aaKnown RBP4.78□□□□□ -1.64
LIMA1-205ENST00000550592 CASKIN1Q8WXD9 1431 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 DHX57Q6P158 1386 aaKnown RBP4.78□□□□□ -1.64
LIMA1-205ENST00000550592 PTPRCP08575 1304 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 LILRA5A6NI73 299 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 A8MXE2 369 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 CREG1O75629 220 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 PSMD10O75832 226 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 KDM4BO94953 1096 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 NMBRP28336 390 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 CORO1AP31146 461 aaKnown RBP4.77□□□□□ -1.65
LIMA1-205ENST00000550592 CTSCP53634 463 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 GAGE2BQ13066 116 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 ALCAMQ13740 583 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 KRT33BQ14525 404 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 GAGE2EQ4V326 116 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 CBWD6Q4V339 395 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 RAB6CQ53S08 254 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 CBWD3Q5JTY5 395 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 GAGE2AQ6NT46 116 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 KRT77Q7Z794 578 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 CEP57Q86XR8 500 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 GALNT13Q8IUC8 556 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 SLC5A8Q8N695 610 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 TSPAN14Q8NG11 270 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 OR10S1Q8NGN2 331 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 ELP5Q8TE02 316 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 SCARB1Q8WTV0 552 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 TMED6Q8WW62 240 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 ABTB1Q969K4 478 aaPredicted RBP4.77□□□□□ -1.65
LIMA1-205ENST00000550592 PIGTQ969N2 578 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 NEK1Q96PY6 1258 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 SEZ6LQ9BYH1 1024 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 RAB6CQ9H0N0 254 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 CHMP1AQ9HD42 196 aaPredicted RBP4.77□□□□□ -1.65
LIMA1-205ENST00000550592 ZCCHC17Q9NP64 241 aaKnown RBP4.77□□□□□ -1.65
LIMA1-205ENST00000550592 OCIAD1Q9NX40 245 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 TAS2R14Q9NYV8 317 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 BCCIPQ9P287 314 aaKnown RBP eCLIP4.77□□□□□ -1.65
LIMA1-205ENST00000550592 C5AR2Q9P296 337 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 GAGE2DQ9UEU5 116 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 SIX4Q9UIU6 781 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 B3GALT5Q9Y2C3 310 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 CCL27Q9Y4X3 112 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 RRBP1Q9P2E9 1410 aaKnown RBP4.77□□□□□ -1.65
LIMA1-205ENST00000550592 PCSK5Q92824 1860 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 METP08581 1390 aa4.77□□□□□ -1.65
LIMA1-205ENST00000550592 PDS5AQ29RF7 1337 aaKnown RBP4.76□□□□□ -1.65
LIMA1-205ENST00000550592 CCDC144AA2RUR9 1427 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 SRRM3A6NNA2 597 aaPredicted RBP4.76□□□□□ -1.65
LIMA1-205ENST00000550592 PROB1E7EW31 1015 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 H0YIN7 160 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 TMEM189-UBE2V1I3L0A0 370 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 CLGNO14967 610 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 ZWINTO95229 277 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 BMP15O95972 392 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 BCL10O95999 233 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 APOA4P06727 396 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 LINC00271P0C7V0 271 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 MYBL1P10243 752 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 CCR3P51677 355 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 RAD23AP54725 363 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 SEC61A1P61619 476 aaKnown RBP4.76□□□□□ -1.65
LIMA1-205ENST00000550592 TUBA1BP68363 451 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 DLG1Q12959 904 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 UBE2V1Q13404 147 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 CKAP5Q14008 2032 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 IL11RAQ14626 422 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 ZNF628Q5EBL2 1059 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 TRNP1Q6NT89 227 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms