RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 KIR2DS3K7RE56 304 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 KIF1CO43896 1103 aaKnown RBP10.96□□□□□ -0.65
RAB5B-208ENST00000550283 BRINP1O60477 761 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 PROS1P07225 676 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 CDK4P11802 303 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 CCL4P13236 92 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 ITIH1P19827 911 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 PAFAH1B1P43034 410 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 ABCG1P45844 678 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 LEPRP48357 1165 aaKnown RBP10.96□□□□□ -0.65
RAB5B-208ENST00000550283 ITIH4Q14624 930 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 KIR2DS5Q14953 304 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 RTP5Q14D33 572 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 TYSND1Q2T9J0 566 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 FASTKD1Q53R41 847 aaKnown RBP10.96□□□□□ -0.65
RAB5B-208ENST00000550283 UBAP2Q5T6F2 1119 aaKnown RBP10.96□□□□□ -0.65
RAB5B-208ENST00000550283 KIAA0930Q6ICG6 404 aaPredicted RBP10.96□□□□□ -0.65
RAB5B-208ENST00000550283 CASC4Q6P4E1 433 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 ZNF549Q6P9A3 640 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 TRMT10BQ6PF06 316 aaKnown RBP10.96□□□□□ -0.65
RAB5B-208ENST00000550283 TMEM26Q6ZUK4 368 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 NLRP9Q7RTR0 991 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 OR6C4Q8NGE1 309 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 HM13Q8TCT9 377 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 LPGAT1Q92604 370 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 FAM136AQ96C01 138 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 CCDC74BQ96LY2 380 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 C12orf66Q96MD2 445 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 PPM1MQ96MI6 270 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 BIRC8Q96P09 236 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 DEPDC7Q96QD5 511 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 SLC30A3Q99726 388 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 CCM2Q9BSQ5 444 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 EPB41L5Q9HCM4 733 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 XAB2Q9HCS7 855 aaKnown RBP10.96□□□□□ -0.65
RAB5B-208ENST00000550283 ASCL3Q9NQ33 180 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 IMP3Q9NV31 184 aaKnown RBP10.96□□□□□ -0.65
RAB5B-208ENST00000550283 MED16Q9Y2X0 877 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 MAD1L1Q9Y6D9 718 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 DNMT3AQ9Y6K1 912 aaPredicted RBP10.96□□□□□ -0.65
RAB5B-208ENST00000550283 RPS6KL1Q9Y6S9 549 aa10.96□□□□□ -0.65
RAB5B-208ENST00000550283 APC2O95996 2303 aa10.96□□□□□ -0.66
RAB5B-208ENST00000550283 KNTC1P50748 2209 aa10.96□□□□□ -0.66
RAB5B-208ENST00000550283 UNC13CQ8NB66 2214 aa10.96□□□□□ -0.66
RAB5B-208ENST00000550283 DSPP15924 2871 aaKnown RBP10.95□□□□□ -0.66
RAB5B-208ENST00000550283 EFCAB8A8MWE9 144 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 NIPSNAP2O75323 286 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 TCEA3O75764 348 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 PIAS1O75925 651 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 URI1O94763 535 aaPredicted RBP10.95□□□□□ -0.66
RAB5B-208ENST00000550283 S1PR4O95977 384 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 MTHFD1P11586 935 aaKnown RBP10.95□□□□□ -0.66
RAB5B-208ENST00000550283 GABRB3P28472 473 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 ELK3P41970 407 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 NSG1P42857 185 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 GPR3P46089 330 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 INHBCP55103 352 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 GABREP78334 506 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 MPP1Q00013 466 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 TIAL1Q01085 375 aaKnown RBP eCLIP10.95□□□□□ -0.66
RAB5B-208ENST00000550283 SLC7A5Q01650 507 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 CTBP1Q13363 440 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 SQSTM1Q13501 440 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 DHX34Q14147 1143 aaKnown RBP10.95□□□□□ -0.66
RAB5B-208ENST00000550283 BBS9Q3SYG4 887 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 MAP9Q49MG5 647 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 DUPD1Q68J44 220 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 FOXR1Q6PIV2 292 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 ZDHHC24Q6UX98 284 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 SLC9B2Q86UD5 537 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 ANKMY2Q8IV38 441 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 KDF1Q8NAX2 398 aaPredicted RBP10.95□□□□□ -0.66
RAB5B-208ENST00000550283 NOA1Q8NC60 698 aaKnown RBP10.95□□□□□ -0.66
RAB5B-208ENST00000550283 LRRN4CLQ8ND94 238 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 ZCCHC14Q8WYQ9 949 aaKnown RBP10.95□□□□□ -0.66
RAB5B-208ENST00000550283 NCSTNQ92542 709 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 PEX13Q92968 403 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 STAMBPL1Q96FJ0 436 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 ZNF514Q96K75 400 aaPredicted RBP10.95□□□□□ -0.66
RAB5B-208ENST00000550283 SLC38A3Q99624 504 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 FBXO6Q9NRD1 293 aaPredicted RBP10.95□□□□□ -0.66
RAB5B-208ENST00000550283 EVA1BQ9NVM1 165 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 RNF14Q9UBS8 474 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 KLHL3Q9UH77 587 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 CIDEBQ9UHD4 219 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 CDC23Q9UJX2 597 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 ZMIZ1Q9ULJ6 1067 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 CHMP2BQ9UQN3 213 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 RUVBL2Q9Y230 463 aaKnown RBP10.95□□□□□ -0.66
RAB5B-208ENST00000550283 CRYL1Q9Y2S2 319 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 RAXQ9Y2V3 346 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 ITPR1Q14643 2758 aa10.95□□□□□ -0.66
RAB5B-208ENST00000550283 PIKFYVEQ9Y2I7 2098 aa10.94□□□□□ -0.66
RAB5B-208ENST00000550283 ESYT3A0FGR9 886 aa10.94□□□□□ -0.66
RAB5B-208ENST00000550283 LILRA5A6NI73 299 aa10.94□□□□□ -0.66
RAB5B-208ENST00000550283 A8MU76 341 aa10.94□□□□□ -0.66
RAB5B-208ENST00000550283 CFAP99D6REC4 459 aa10.94□□□□□ -0.66
RAB5B-208ENST00000550283 AP2A2O94973 939 aa10.94□□□□□ -0.66
RAB5B-208ENST00000550283 CPNE6O95741 557 aa10.94□□□□□ -0.66
RAB5B-208ENST00000550283 VIPP01282 170 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms