RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 PDP2Q9P2J9 529 aa11.66□□□□□ -0.54
PFDN5-208ENST00000549995 KLHL42Q9P2K6 505 aa11.66□□□□□ -0.54
PFDN5-208ENST00000549995 GNPTGQ9UJJ9 305 aa11.66□□□□□ -0.54
PFDN5-208ENST00000549995 DNAJC16Q9Y2G8 782 aa11.66□□□□□ -0.54
PFDN5-208ENST00000549995 MAD1L1Q9Y6D9 718 aa11.66□□□□□ -0.54
PFDN5-208ENST00000549995 CHD8Q9HCK8 2581 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 H3BMM5 538 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 PFDN6O15212 129 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 ZW10O43264 779 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 B4GAT1O43505 415 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 HYAL3O43820 417 aaPredicted RBP11.65□□□□□ -0.54
PFDN5-208ENST00000549995 MT-CO3P00414 261 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 C1QAP02745 245 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 GSTA2P09210 222 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 MTHFD1P11586 935 aaKnown RBP11.65□□□□□ -0.54
PFDN5-208ENST00000549995 ACADLP28330 430 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 ATP5DP30049 168 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 CCKBRP32239 447 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 HALP42357 657 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 SLC1A2P43004 574 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 LEPRP48357 1165 aaKnown RBP11.65□□□□□ -0.54
PFDN5-208ENST00000549995 FOXC1Q12948 553 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 FASTKD3Q14CZ7 662 aaKnown RBP11.65□□□□□ -0.54
PFDN5-208ENST00000549995 RPE65Q16518 533 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 ZNF470Q6ECI4 717 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 TMEM26Q6ZUK4 368 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 LDB1Q86U70 411 aaPredicted RBP11.65□□□□□ -0.54
PFDN5-208ENST00000549995 PDZD3Q86UT5 571 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 SLITRK4Q8IW52 837 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 SLC22A15Q8IZD6 547 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 LILRA3Q8N6C8 439 aaPredicted RBP11.65□□□□□ -0.54
PFDN5-208ENST00000549995 LKAAEAR1Q8TD35 194 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 NAT14Q8WUY8 206 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 PANX3Q96QZ0 392 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 INSM2Q96T92 566 aaPredicted RBP11.65□□□□□ -0.54
PFDN5-208ENST00000549995 MCMBPQ9BTE3 642 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 SCNM1Q9BWG6 230 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 TSSK1BQ9BXA7 367 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 RAB33BQ9H082 229 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 OSGEPL1Q9H4B0 414 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 FAM114A2Q9NRY5 505 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 ZC3H7BQ9UGR2 993 aaKnown RBP11.65□□□□□ -0.54
PFDN5-208ENST00000549995 DMGDHQ9UI17 866 aaKnown RBP11.65□□□□□ -0.54
PFDN5-208ENST00000549995 ANGPTL2Q9UKU9 493 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 CLCA2Q9UQC9 943 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 CHMP2BQ9UQN3 213 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 MED16Q9Y2X0 877 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 COMMD10Q9Y6G5 202 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 UNC13CQ8NB66 2214 aa11.65□□□□□ -0.54
PFDN5-208ENST00000549995 MN1Q10571 1320 aaPredicted RBP11.64□□□□□ -0.55
PFDN5-208ENST00000549995 OR52A4PA6NMU1 304 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 RHPN2P1A8MT19 583 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 PDZK1P1A8MUH7 402 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 GOLGA8KD6RF30 607 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 GOLGA8TH3BQL2 631 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 KPNA5O15131 536 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 SNX2O60749 519 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 NDUFS3O75489 264 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 SLCO2B1O94956 709 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 CPNE6O95741 557 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 TOP3BO95985 862 aaKnown RBP11.64□□□□□ -0.55
PFDN5-208ENST00000549995 CAPNS1P04632 268 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 SLC35G4P0C7Q5 338 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 RPL10P27635 214 aaKnown RBP11.64□□□□□ -0.55
PFDN5-208ENST00000549995 AOAHP28039 575 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 NDUFS1P28331 727 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 CD1CP29017 333 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 ECHS1P30084 290 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 CCR7P32248 378 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 CCL7P80098 99 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 ZFP36L1Q07352 338 aaKnown RBP11.64□□□□□ -0.55
PFDN5-208ENST00000549995 PDIA2Q13087 525 aaKnown RBP11.64□□□□□ -0.55
PFDN5-208ENST00000549995 BOP1Q14137 746 aaKnown RBP11.64□□□□□ -0.55
PFDN5-208ENST00000549995 TRADDQ15628 312 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 HSP90AA5PQ58FG0 334 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 ZNF789Q5FWF6 425 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 PLEKHS1Q5SXH7 462 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 WDR74Q6RFH5 385 aaPredicted RBP11.64□□□□□ -0.55
PFDN5-208ENST00000549995 IGF2-ASQ6U949 168 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 RBM44Q6ZP01 1051 aaKnown RBP11.64□□□□□ -0.55
PFDN5-208ENST00000549995 DENND6AQ8IWF6 608 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 UNC5BQ8IZJ1 945 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 FBXO36Q8NEA4 188 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 GABPB2Q8TAK5 448 aaPredicted RBP11.64□□□□□ -0.55
PFDN5-208ENST00000549995 GSDMBQ8TAX9 411 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 KCNJ9Q92806 393 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 GATA6Q92908 595 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 LIN37Q96GY3 246 aaPredicted RBP11.64□□□□□ -0.55
PFDN5-208ENST00000549995 DEPDC7Q96QD5 511 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 WWP1Q9H0M0 922 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 C20orf96Q9NUD7 363 aaPredicted RBP11.64□□□□□ -0.55
PFDN5-208ENST00000549995 IL1RAPL1Q9NZN1 696 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 OGFRQ9NZT2 677 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 KLK13Q9UKR3 277 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 FBXO5Q9UKT4 447 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 CORO1CQ9ULV4 474 aaPredicted RBP11.64□□□□□ -0.55
PFDN5-208ENST00000549995 HEBP2Q9Y5Z4 205 aa11.64□□□□□ -0.55
PFDN5-208ENST00000549995 TMX2-CTNND1H3BSU7 103 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 EIF3FO00303 357 aaPredicted RBP11.63□□□□□ -0.55
PFDN5-208ENST00000549995 CASC3O15234 703 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms