RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	PDXP	Q96GD0	296 aa		12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	ZC3H10	Q96K80	434 aa	Known RBP	12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	TIMM29	Q9BSF4	260 aa		12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	COL25A1	Q9BXS0	654 aa	Predicted RBP	12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	DERL2	Q9GZP9	239 aa		12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	NMRAL1	Q9HBL8	299 aa		12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	CYP4F12	Q9HCS2	524 aa		12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	MRPL40	Q9NQ50	206 aa	Known RBP	12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	ZNF358	Q9NW07	568 aa		12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	GULP1	Q9UBP9	304 aa		12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	KL	Q9UEF7	1012 aa		12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	MOSPD1	Q9UJG1	213 aa		12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	RUVBL2	Q9Y230	463 aa	Known RBP	12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	CDYL	Q9Y232	598 aa		12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	PLLP	Q9Y342	182 aa		12.01	□□□□□ -0.49
ERBB3-208	ENST00000549205	ZNF292	O60281	2723 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	SLC5A10	A0PJK1	596 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	PRR33	A8MZF0	331 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	TLR4	O00206	839 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	TM9SF1	O15321	606 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	BCAT2	O15382	392 aa	Predicted RBP	12	□□□□□ -0.49
ERBB3-208	ENST00000549205	GALR2	O43603	387 aa	Predicted RBP	12	□□□□□ -0.49
ERBB3-208	ENST00000549205	SNRNP200	O75643	2136 aa	Known RBP	12	□□□□□ -0.49
ERBB3-208	ENST00000549205	SLCO2B1	O94956	709 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	WNT1	P04628	370 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	CD1D	P15813	335 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	GNPDA1	P46926	289 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	NUBP1	P53384	320 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	SRP54	P61011	504 aa	Known RBP	12	□□□□□ -0.49
ERBB3-208	ENST00000549205	ATP6V0D1	P61421	351 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	DMPK	Q09013	629 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	HSPA14	Q0VDF9	509 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	FZD2	Q14332	565 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	ALG11	Q2TAA5	492 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	12	□□□□□ -0.49
ERBB3-208	ENST00000549205	LRRC8E	Q6NSJ5	796 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	XKR5	Q6UX68	686 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	CEP68	Q76N32	757 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	ARFGAP2	Q8N6H7	521 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	FAM76A	Q8TAV0	307 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	DENND1A	Q8TEH3	1009 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	TSACC	Q96A04	125 aa	Predicted RBP	12	□□□□□ -0.49
ERBB3-208	ENST00000549205	TMEM159	Q96B96	161 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	OR2M4	Q96R27	311 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	C12orf65	Q9H3J6	166 aa	Known RBP	12	□□□□□ -0.49
ERBB3-208	ENST00000549205	CNOT10	Q9H9A5	744 aa	Known RBP	12	□□□□□ -0.49
ERBB3-208	ENST00000549205	CARS2	Q9HA77	564 aa	Known RBP	12	□□□□□ -0.49
ERBB3-208	ENST00000549205	TM7SF3	Q9NS93	570 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	NKIRAS1	Q9NYS0	192 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	TMEM216	Q9P0N5	145 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	SLC17A7	Q9P2U7	560 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	FAM8A1	Q9UBU6	413 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	SLC23A2	Q9UGH3	650 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	EMCN	Q9ULC0	261 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	PNMA8B	Q9ULN7	279 aa	Predicted RBP	12	□□□□□ -0.49
ERBB3-208	ENST00000549205	PCDHGA2	Q9Y5H1	932 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	DGKB	Q9Y6T7	804 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	DNAH14	Q0VDD8	3507 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	MYO15A	Q9UKN7	3530 aa		12	□□□□□ -0.49
ERBB3-208	ENST00000549205	CCDC189	A1A4V9	331 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	PRR19	A6NJB7	356 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	VILL	O15195	856 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	ZBTB14	O43829	449 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	PLIN3	O60664	434 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	KCNJ13	O60928	360 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	PROC	P04070	461 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	MPC1L	P0DKB6	136 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	ACP5	P13686	325 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	VCL	P18206	1134 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	TFEB	P19484	476 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	ETV4	P43268	484 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	PREP	P48147	710 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	GLRB	P48167	497 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	AFF3	P51826	1226 aa	Known RBP	11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	PLOD1	Q02809	727 aa	Predicted RBP	11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	PPARD	Q03181	441 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	EIF2B5	Q13144	721 aa	Known RBP	11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	RPA4	Q13156	261 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	NFE2L1	Q14494	772 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	ACAP2	Q15057	778 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	CCDC153	Q494R4	210 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	C16orf46	Q6P387	395 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	LAYN	Q6UX15	382 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	NEK10	Q6ZWH5	1172 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	CHST15	Q7LFX5	561 aa	Predicted RBP	11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	RD3	Q7Z3Z2	195 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	PIWIL4	Q7Z3Z4	852 aa	Known RBP	11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	ISCA2	Q86U28	154 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	PARG	Q86W56	976 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	HID1	Q8IV36	788 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	VRK3	Q8IV63	474 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	CFAP206	Q8IYR0	622 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	SLC22A15	Q8IZD6	547 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	MYO1H	Q8N1T3	1032 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	FSTL5	Q8N475	847 aa	Predicted RBP	11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	LILRA3	Q8N6C8	439 aa	Predicted RBP	11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	ANKRD42	Q8N9B4	389 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	MDM1	Q8TC05	714 aa		11.99	□□□□□ -0.49
ERBB3-208	ENST00000549205	PTER	Q96BW5	349 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms