RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 FRS2Q8WU20 508 aa22.79■■□□□ 1.24
NPAS3-206ENST00000548645 FAM162AQ96A26 154 aa22.79■■□□□ 1.24
NPAS3-206ENST00000548645 HMCESQ96FZ2 354 aa22.79■■□□□ 1.24
NPAS3-206ENST00000548645 EHD1Q9H4M9 534 aa22.79■■□□□ 1.24
NPAS3-206ENST00000548645 TTC34A8MYJ7 566 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 G6PDP11413 515 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 MSH3P20585 1137 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 ZNF792Q3KQV3 632 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 CYP20A1Q6UW02 462 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 DCP2Q8IU60 420 aaKnown RBP22.78■■□□□ 1.24
NPAS3-206ENST00000548645 THUMPD3Q9BV44 507 aaKnown RBP22.78■■□□□ 1.24
NPAS3-206ENST00000548645 ERVK-18Q9QC07 812 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 ISPDA4D126 451 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 NPEPPSL1A6NEC2 478 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 BTN3A1O00481 513 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 PRKACGP22612 351 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 CD40LGP29965 261 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 ST13P50502 369 aaKnown RBP22.78■■□□□ 1.24
NPAS3-206ENST00000548645 PLIN5Q00G26 463 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 NRG1Q02297 640 aaPredicted RBP22.78■■□□□ 1.24
NPAS3-206ENST00000548645 NPTX1Q15818 432 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 TYSND1Q2T9J0 566 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 THOC7Q6I9Y2 204 aaKnown RBP22.78■■□□□ 1.24
NPAS3-206ENST00000548645 TWF2Q6IBS0 349 aaKnown RBP22.78■■□□□ 1.24
NPAS3-206ENST00000548645 ZNF548Q8NEK5 533 aaPredicted RBP22.78■■□□□ 1.24
NPAS3-206ENST00000548645 OR6J1Q8NGC5 347 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 OR13C4Q8NGS5 318 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 SCAMP5Q8TAC9 235 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 PPP1R13LQ8WUF5 828 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 C17orf50Q8WW18 174 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 REXO5Q96IC2 774 aaKnown RBP22.78■■□□□ 1.24
NPAS3-206ENST00000548645 NSMCE3Q96MG7 304 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 IFT52Q9Y366 437 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 PRKD3O94806 890 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 SCELO95171 688 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 SMIM10L2AP0DMW4 78 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 SMIM10L2BP0DMW5 78 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 MLLT6P55198 1093 aaPredicted RBP22.78■■□□□ 1.24
NPAS3-206ENST00000548645 SYT6Q5T7P8 510 aaPredicted RBP22.78■■□□□ 1.24
NPAS3-206ENST00000548645 PRSS48Q7RTY5 328 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 PAGE2Q7Z2X7 111 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 ABI1Q8IZP0 508 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 NKAPQ8N5F7 415 aaKnown RBP22.78■■□□□ 1.24
NPAS3-206ENST00000548645 OR10A6Q8NH74 314 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 ARRDC2Q8TBH0 407 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 TADA1Q96BN2 335 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 ACTL8Q9H568 366 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 ANKHQ9HCJ1 492 aa22.78■■□□□ 1.24
NPAS3-206ENST00000548645 DFNA5O60443 496 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 PTPN2P17706 415 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 FMO4P31512 558 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 PPP1R8Q12972 351 aaKnown RBP22.77■■□□□ 1.24
NPAS3-206ENST00000548645 AKAP14Q86UN6 197 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 HIPK1Q86Z02 1210 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 OR52E4Q8NGH9 312 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 PSMA8Q8TAA3 256 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 ZNF382Q96SR6 550 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 ALOXE3Q9BYJ1 711 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 DSN1Q9H410 356 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 VAPAQ9P0L0 249 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 UTS2RQ9UKP6 389 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 PCDHGA10Q9Y5H3 936 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 FAM47E-STBD1D6RA91 191 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 PRMT5O14744 637 aaPredicted RBP22.77■■□□□ 1.24
NPAS3-206ENST00000548645 GSNP06396 782 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 HAPLN1P10915 354 aaPredicted RBP22.77■■□□□ 1.24
NPAS3-206ENST00000548645 ITGAMP11215 1152 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 MAP2K4P45985 399 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 RAPSNQ13702 412 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 SETMARQ53H47 684 aaPredicted RBP22.77■■□□□ 1.24
NPAS3-206ENST00000548645 MSANTD2Q6P1R3 559 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 DLK2Q6UY11 383 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 LGI2Q8N0V4 545 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 TXNDC15Q96J42 360 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 SGIP1Q9BQI5 828 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 DUSP21Q9H596 190 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 SCN3BQ9NY72 215 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 NEUROG3Q9Y4Z2 214 aa22.77■■□□□ 1.24
NPAS3-206ENST00000548645 ELOVL7A1L3X0 281 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 FGF1P05230 155 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 HLA-DPA1P20036 260 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 FSHRP23945 695 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 PSMB9P28065 219 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 ALDH7A1P49419 539 aaKnown RBP22.76■■□□□ 1.23
NPAS3-206ENST00000548645 CLCNKBP51801 687 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 TMEM179BQ7Z7N9 219 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 TEX26Q8N6G2 289 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 BRSK1Q8TDC3 778 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 KATNBL1Q9H079 304 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 TPK1Q9H3S4 243 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 TMEFF2Q9UIK5 374 aaPredicted RBP22.76■■□□□ 1.23
NPAS3-206ENST00000548645 ZBBXA8MT70 800 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 CXCR6O00574 342 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 FTH1P02794 183 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 SMPD1P17405 629 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 JUNDP17535 347 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 NCS1P62166 190 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 CYP4F3Q08477 520 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 CLCA4Q14CN2 919 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 ATAD3BQ5T9A4 648 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms