RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 OSBPL6Q9BZF3 934 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 TOR3AQ9H497 397 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 LATS2Q9NRM7 1088 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 CORINQ9Y5Q5 1042 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 A0A0C4DFX4 3053 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 EEDO75530 441 aaKnown RBP14.81□□□□□ -0.04
USP28-214ENST00000545540 MYCLP1P12525 358 aaPredicted RBP14.81□□□□□ -0.04
USP28-214ENST00000545540 OGNP20774 298 aaKnown RBP14.81□□□□□ -0.04
USP28-214ENST00000545540 PTPRDP23468 1912 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 MAP4P27816 1152 aaKnown RBP14.81□□□□□ -0.04
USP28-214ENST00000545540 DSC1Q08554 894 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 SF1Q15637 639 aaKnown RBP14.81□□□□□ -0.04
USP28-214ENST00000545540 PRMT9Q6P2P2 845 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 R3HCC1LQ7Z5L2 792 aaKnown RBP14.81□□□□□ -0.04
USP28-214ENST00000545540 SPRED1Q7Z699 444 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 TMCO2Q7Z6W1 182 aaPredicted RBP14.81□□□□□ -0.04
USP28-214ENST00000545540 IFNL1Q8IU54 200 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 HID1Q8IV36 788 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 CDC26Q8NHZ8 85 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 CGREF1Q99674 301 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 MGME1Q9BQP7 344 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 PCDH12Q9NPG4 1184 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 ADGRE2Q9UHX3 823 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 Q9Y3F1 56 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 ANGPTL3Q9Y5C1 460 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 PCDHGA11Q9Y5H2 935 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 SCN10AQ9Y5Y9 1956 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.8□□□□□ -0.04
USP28-214ENST00000545540 H0YJX3 145 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 COCHO43405 550 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 PRKD3O94806 890 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 OR1D2P34982 312 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 ATP5C1P36542 298 aaKnown RBP14.8□□□□□ -0.04
USP28-214ENST00000545540 SLC11A1P49279 550 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 ARSFP54793 590 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 MLLT10P55197 1068 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 FPGSQ05932 587 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 ZNF177Q13360 481 aaPredicted RBP14.8□□□□□ -0.04
USP28-214ENST00000545540 GTF2H2Q13888 395 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 XKR7Q5GH72 579 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 MFSD14CQ5VZR4 134 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 GTF2H2CQ6P1K8 395 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 BTLAQ7Z6A9 289 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 TMEM179BQ7Z7N9 219 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 PATL1Q86TB9 770 aaKnown RBP14.8□□□□□ -0.04
USP28-214ENST00000545540 ADGRG2Q8IZP9 1017 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 WFDC5Q8TCV5 224 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 SDCCAG3Q96C92 435 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 LRRC3Q9BY71 257 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 PKD2L2Q9NZM6 624 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 PCDHGA8Q9Y5G5 932 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 XPNPEP2O43895 674 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 MITFO75030 526 aaPredicted RBP14.8□□□□□ -0.04
USP28-214ENST00000545540 YBEYP58557 167 aaPredicted RBP14.8□□□□□ -0.04
USP28-214ENST00000545540 ARF5P84085 180 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 TAF1AQ15573 450 aaPredicted RBP14.8□□□□□ -0.04
USP28-214ENST00000545540 BBS5Q8N3I7 341 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 BCL7CQ8WUZ0 217 aaPredicted RBP14.8□□□□□ -0.04
USP28-214ENST00000545540 SLC22A12Q96S37 553 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 LHPPQ9H008 270 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 TNKS2Q9H2K2 1166 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 HPS4Q9NQG7 708 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 UPK1AO00322 258 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 SMAD6O43541 496 aaKnown RBP14.8□□□□□ -0.04
USP28-214ENST00000545540 SEC22BO75396 215 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 CST1P01037 141 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 GPIP06744 558 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 FAM189BP81408 668 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 ARHGEF7Q14155 803 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 SPIDRQ14159 915 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 RFLNAQ6ZTI6 216 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 DET1Q7L5Y6 550 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 RASAL3Q86YV0 1011 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 DBF4BQ8NFT6 615 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 MYLIPQ8WY64 445 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 ZNF583Q96ND8 569 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 ASB2Q96Q27 587 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 BARD1Q99728 777 aaKnown RBP14.8□□□□□ -0.04
USP28-214ENST00000545540 RHNO1Q9BSD3 238 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 PKP3Q9Y446 797 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 SLC30A1Q9Y6M5 507 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 TRPM7Q96QT4 1865 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 PATJQ8NI35 1801 aa14.8□□□□□ -0.04
USP28-214ENST00000545540 SLC38A8A6NNN8 435 aa14.79□□□□□ -0.04
USP28-214ENST00000545540 HS6ST1O60243 411 aa14.79□□□□□ -0.04
USP28-214ENST00000545540 E2F6O75461 281 aa14.79□□□□□ -0.04
USP28-214ENST00000545540 SLC25A14O95258 325 aaPredicted RBP14.79□□□□□ -0.04
USP28-214ENST00000545540 MLYCDO95822 493 aa14.79□□□□□ -0.04
USP28-214ENST00000545540 TUBA4AP68366 448 aa14.79□□□□□ -0.04
USP28-214ENST00000545540 SPATA19Q7Z5L4 167 aa14.79□□□□□ -0.04
USP28-214ENST00000545540 ZFAND4Q86XD8 727 aa14.79□□□□□ -0.04
USP28-214ENST00000545540 TBC1D21Q8IYX1 336 aa14.79□□□□□ -0.04
USP28-214ENST00000545540 LIX1Q8N485 282 aa14.79□□□□□ -0.04
USP28-214ENST00000545540 NKAPQ8N5F7 415 aaKnown RBP14.79□□□□□ -0.04
USP28-214ENST00000545540 STON2Q8WXE9 905 aa14.79□□□□□ -0.04
USP28-214ENST00000545540 UROC1Q96N76 676 aa14.79□□□□□ -0.04
USP28-214ENST00000545540 TSSK3Q96PN8 268 aa14.79□□□□□ -0.04
USP28-214ENST00000545540 BDH2Q9BUT1 245 aa14.79□□□□□ -0.04
USP28-214ENST00000545540 INTS10Q9NVR2 710 aaKnown RBP14.79□□□□□ -0.04
USP28-214ENST00000545540 FAM234BA2RU67 622 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms