RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 CNOT1A5YKK6 2376 aaKnown RBP13.35□□□□□ -0.27
SP140-213ENST00000543928 COL5A1P20908 1838 aaPredicted RBP13.35□□□□□ -0.27
SP140-213ENST00000543928 E5RI56 91 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 LIN7AO14910 233 aaPredicted RBP13.35□□□□□ -0.27
SP140-213ENST00000543928 SLC2A4P14672 509 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 BRAFP15056 766 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 CHRM3P20309 590 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 MCM3P25205 808 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 AOAHP28039 575 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 PREPP48147 710 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 RPIAP49247 311 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 PMS2P54278 862 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 CSE1LP55060 971 aaKnown RBP13.35□□□□□ -0.27
SP140-213ENST00000543928 MAZP56270 477 aaKnown RBP13.35□□□□□ -0.27
SP140-213ENST00000543928 NAA30Q147X3 362 aaPredicted RBP13.35□□□□□ -0.27
SP140-213ENST00000543928 CLCA4Q14CN2 919 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 EFTUD2Q15029 972 aaKnown RBP eCLIP13.35□□□□□ -0.27
SP140-213ENST00000543928 TRIP6Q15654 476 aaKnown RBP13.35□□□□□ -0.27
SP140-213ENST00000543928 SYTL3Q4VX76 610 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 C14orf28Q4W4Y0 310 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 AGAP9Q5VTM2 703 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 IYDQ6PHW0 289 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 ABRAXAS1Q6UWZ7 409 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 WASH2PQ6VEQ5 465 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 TRMT10CQ7L0Y3 403 aaKnown RBP13.35□□□□□ -0.27
SP140-213ENST00000543928 PPM1NQ8N819 430 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 SLC37A2Q8TED4 501 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 ATXN7L3BQ96GX2 97 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 AARSD1Q9BTE6 412 aaKnown RBP13.35□□□□□ -0.27
SP140-213ENST00000543928 FUT8Q9BYC5 575 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 PARD6BQ9BYG5 372 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 WWP1Q9H0M0 922 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 WASH6PQ9NQA3 447 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 NCKIPSDQ9NZQ3 722 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 TXNDC16Q9P2K2 825 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 RABGEF1Q9UJ41 708 aa13.35□□□□□ -0.27
SP140-213ENST00000543928 KIR2DS5A0A0G2JLQ3 304 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 A0A0G2JNG1 304 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 SLC5A10A0PJK1 596 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 OR5K4A6NMS3 321 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 KIR2DS3K7RE56 304 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 KPNA5O15131 536 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 TNFSF14O43557 240 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 APOA4P06727 396 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 SLC35G4P0C7Q5 338 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 CKMT1AP12532 417 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 CKMT2P17540 419 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 PDHA2P29803 388 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 HALP42357 657 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 HSPA14Q0VDF9 509 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 RPA4Q13156 261 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 DNAJC3Q13217 504 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 NAB1Q13506 487 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 KIR2DS5Q14953 304 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 TMED2Q15363 201 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 RBM20Q5T481 1227 aaKnown RBP13.34□□□□□ -0.27
SP140-213ENST00000543928 OTOAQ7RTW8 1153 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 ZC3HC1Q86WB0 502 aaKnown RBP13.34□□□□□ -0.27
SP140-213ENST00000543928 C17orf82Q86X59 251 aaPredicted RBP13.34□□□□□ -0.27
SP140-213ENST00000543928 SFRP1Q8N474 314 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 ARL14Q8N4G2 192 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 GPATCH11Q8N954 259 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 UHMK1Q8TAS1 419 aaKnown RBP13.34□□□□□ -0.27
SP140-213ENST00000543928 MAPK15Q8TD08 544 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 ASZ1Q8WWH4 475 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 KCNJ9Q92806 393 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 TMEM159Q96B96 161 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 RMDN2Q96LZ7 410 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 CYTH2Q99418 400 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 CPNE1Q99829 537 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 OR52A5Q9H2C5 316 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 RHOJQ9H4E5 214 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 ACSS3Q9H6R3 686 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 EVA1BQ9NVM1 165 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 ZNF624Q9P2J8 865 aaPredicted RBP13.34□□□□□ -0.27
SP140-213ENST00000543928 GALPQ9UBC7 116 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 CORO1CQ9ULV4 474 aaPredicted RBP13.34□□□□□ -0.27
SP140-213ENST00000543928 PADI4Q9UM07 663 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 MED16Q9Y2X0 877 aa13.34□□□□□ -0.27
SP140-213ENST00000543928 A0A087WUV0 522 aaPredicted RBP13.33□□□□□ -0.28
SP140-213ENST00000543928 DCDC2BA2VCK2 349 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 CPED1A4D0V7 1026 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 OR52A4PA6NMU1 304 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 RIPK2O43353 540 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 VPS26AO75436 327 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 GPC4O75487 556 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 ABHD2P08910 425 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 CEACAM1P13688 526 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 GP5P40197 560 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 DUSP3P51452 185 aaPredicted RBP13.33□□□□□ -0.28
SP140-213ENST00000543928 NOVA1P51513 510 aaKnown RBP13.33□□□□□ -0.28
SP140-213ENST00000543928 CLCN7P51798 805 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 PLOD1Q02809 727 aaPredicted RBP13.33□□□□□ -0.28
SP140-213ENST00000543928 BIRC2Q13490 618 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 RPE65Q16518 533 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 HECTD2Q5U5R9 776 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 CAPRIN2Q6IMN6 1127 aaKnown RBP13.33□□□□□ -0.28
SP140-213ENST00000543928 GUSBP11Q6P575 273 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 EFL1Q7Z2Z2 1120 aaKnown RBP13.33□□□□□ -0.28
SP140-213ENST00000543928 SLC9B2Q86UD5 537 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms