RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 TCF3P15923 654 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 LPOP22079 712 aaPredicted RBP13.52□□□□□ -0.24
VPS33A-208ENST00000543633 HOXD9P28356 352 aaPredicted RBP13.52□□□□□ -0.24
VPS33A-208ENST00000543633 NRIP1P48552 1158 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 ERVPABLB-1P60509 514 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 KIAA0040Q15053 153 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 DEFB115Q30KQ5 88 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 GALNT18Q6P9A2 607 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 CDYL2Q8N8U2 506 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 OR5K1Q8NHB7 308 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 S100ZQ8WXG8 99 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 LINGO1Q96FE5 620 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 CAPNS2Q96L46 248 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 CEP295NLQ96MC4 621 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 PPM1MQ96MI6 270 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 HMG20AQ9NP66 347 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 CREBZFQ9NS37 354 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 MARCH2Q9P0N8 246 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 GALPQ9UBC7 116 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 C3orf18Q9UK00 162 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 SPO11Q9Y5K1 396 aa13.52□□□□□ -0.24
VPS33A-208ENST00000543633 CLDN25C9JDP6 229 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 FOXD2O60548 495 aaPredicted RBP13.52□□□□□ -0.25
VPS33A-208ENST00000543633 OTCP00480 354 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 UGT2B4P06133 528 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 CTSHP09668 335 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 PCSK2P16519 638 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 CDH3P22223 829 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 NFKBIAP25963 317 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 AKT1P31749 480 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 RYKP34925 604 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 TPD52P55327 224 aaPredicted RBP13.52□□□□□ -0.25
VPS33A-208ENST00000543633 MTPNP58546 118 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 OCA2Q04671 838 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 BFSP2Q13515 415 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 SELPLGQ14242 412 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 ACOX1Q15067 660 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 NR6A1Q15406 480 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 PLA2G4EQ3MJ16 856 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 ZIK1Q3SY52 487 aaPredicted RBP13.52□□□□□ -0.25
VPS33A-208ENST00000543633 CTSL3PQ5NE16 218 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 LETMD1Q6P1Q0 360 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 CHST15Q7LFX5 561 aaPredicted RBP13.52□□□□□ -0.25
VPS33A-208ENST00000543633 RALGPS2Q86X27 583 aaPredicted RBP13.52□□□□□ -0.25
VPS33A-208ENST00000543633 ADHFE1Q8IWW8 467 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 FBLIM1Q8WUP2 373 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 SLC47A1Q96FL8 570 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 VMP1Q96GC9 406 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 ACOX2Q99424 681 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 ARHGAP39Q9C0H5 1083 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 TLR8Q9NR97 1041 aaKnown RBP13.52□□□□□ -0.25
VPS33A-208ENST00000543633 PADI3Q9ULW8 664 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 PCDHB5Q9Y5E4 795 aa13.52□□□□□ -0.25
VPS33A-208ENST00000543633 ENPP3O14638 875 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 GSTA4O15217 222 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 SLC16A6O15403 523 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 ITGB1P05556 798 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 PIRTP0C851 137 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 ITGAMP11215 1152 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 G6PDP11413 515 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 CR2P20023 1033 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 TACR2P21452 398 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 PTGER3P43115 390 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 CAP1Q01518 475 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 TRIM32Q13049 653 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 GDF6Q6KF10 455 aaPredicted RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 METTL2BQ6P1Q9 378 aaKnown RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 SLC16A12Q6ZSM3 486 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 IGFN1Q86VF2 1251 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 ZCCHC7Q8N3Z6 543 aaKnown RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 BPIFB6Q8NFQ5 453 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 ABHD11Q8NFV4 315 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 METTL6Q8TCB7 284 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 SLC13A3Q8WWT9 602 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 TBC1D20Q96BZ9 403 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 RPL10LQ96L21 214 aaKnown RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 C17orf80Q9BSJ5 609 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 CINPQ9BW66 212 aaPredicted RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 MROQ9BYG7 248 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 ADNPQ9H2P0 1102 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 PCDHGA8Q9Y5G5 932 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 V9GYQ6 96 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 FRMPD3Q5JV73 1810 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 NCF1BA6NI72 391 aaPredicted RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 NCF1CA8MVU1 366 aaPredicted RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 FAM220BPB1ANY3 271 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 F5H5T6 163 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 MRPS14O60783 128 aaKnown RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 COQ9O75208 318 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 DUSP11O75319 330 aaKnown RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 WDR47O94967 919 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 CST1P01037 141 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 S100BP04271 92 aaPredicted RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 CAPN1P07384 714 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 HTR1AP08908 422 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 PRSS56P0CW18 603 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 AKR1A1P14550 325 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 NCF1P14598 390 aaPredicted RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 RAD23AP54725 363 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 CYP4F3Q08477 520 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms