RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 SPATA17Q96L03 361 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 TLR9Q9NR96 1032 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 FNDC3AQ9Y2H6 1198 aaKnown RBP16.34■□□□□ 0.21
KDM2B-216ENST00000543025 PCDHGC4Q9Y5F7 938 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 TNPO3Q9Y5L0 923 aaKnown RBP16.34■□□□□ 0.21
KDM2B-216ENST00000543025 GREB1Q4ZG55 1949 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 OR6C75A6NL08 312 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 ANKRD66B4E2M5 251 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 STX7O15400 261 aaKnown RBP16.34■□□□□ 0.21
KDM2B-216ENST00000543025 ESR1P03372 595 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 THRBP10828 461 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 MBL2P11226 248 aaPredicted RBP16.34■□□□□ 0.21
KDM2B-216ENST00000543025 MBTPS1Q14703 1052 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 PCBP2Q15366 365 aaKnown RBP eCLIP16.34■□□□□ 0.21
KDM2B-216ENST00000543025 SLC24A5Q71RS6 500 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 ZNF554Q86TJ5 538 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 RTN4RL1Q86UN2 441 aaPredicted RBP16.34■□□□□ 0.21
KDM2B-216ENST00000543025 ITIH5Q86UX2 942 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 OR8J3Q8NGG0 315 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 TBC1D15Q8TC07 691 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 ADGRE3Q9BY15 652 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 BPIFA1Q9NP55 256 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 AGO1Q9UL18 857 aaKnown RBP16.34■□□□□ 0.21
KDM2B-216ENST00000543025 RAI2Q9Y5P3 530 aa16.34■□□□□ 0.21
KDM2B-216ENST00000543025 MTMR11A4FU01 709 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 FOXD2O60548 495 aaPredicted RBP16.33■□□□□ 0.2
KDM2B-216ENST00000543025 ZDHHC11BP0C7U3 371 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 JAK1P23458 1154 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 NFKBIAP25963 317 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 PTGER3P43115 390 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 BFSP2Q13515 415 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 MRPL58Q14197 206 aaKnown RBP16.33■□□□□ 0.2
KDM2B-216ENST00000543025 CBX2Q14781 532 aaPredicted RBP16.33■□□□□ 0.2
KDM2B-216ENST00000543025 FAM171A1Q5VUB5 890 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 BROXQ5VW32 411 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 LRRC8DQ7L1W4 858 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 GOLGA7Q7Z5G4 137 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 EFHBQ8N7U6 833 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 HBEGFQ99075 208 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 PAIP1Q9H074 479 aaKnown RBP16.33■□□□□ 0.2
KDM2B-216ENST00000543025 CRISPLD1Q9H336 500 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 CHCHD3Q9NX63 227 aaKnown RBP16.33■□□□□ 0.2
KDM2B-216ENST00000543025 POLR3HQ9Y535 204 aaPredicted RBP16.33■□□□□ 0.2
KDM2B-216ENST00000543025 SCN5AQ14524 2016 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 ALPK3Q96L96 1907 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 H7C0S8 307 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 ANKRD28O15084 1053 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 KCNH1O95259 989 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 HPRP00739 348 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 HNRNPCP07910 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
KDM2B-216ENST00000543025 SELPP16109 830 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 JUNBP17275 347 aaPredicted RBP16.33■□□□□ 0.2
KDM2B-216ENST00000543025 POLR2IP36954 125 aaKnown RBP16.33■□□□□ 0.2
KDM2B-216ENST00000543025 MTHFRP42898 656 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 TMBIM6P55061 237 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 AP5B1Q2VPB7 878 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 UBE2Q1Q7Z7E8 422 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 STK32CQ86UX6 486 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 ZDHHC13Q8IUH4 622 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 OR4F6Q8NGB9 312 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 SDCCAG3Q96C92 435 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 RDH12Q96NR8 316 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 CCDC115Q96NT0 180 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 UGT2B28Q9BY64 529 aa16.33■□□□□ 0.2
KDM2B-216ENST00000543025 VWA8A3KMH1 1905 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 H3BNC9 293 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 PITPNM1O00562 1244 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 B4GAT1O43505 415 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 PCNAP12004 261 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 TCF3P15923 654 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 CCNA2P20248 432 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 CD247P20963 164 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 MAP4P27816 1152 aaKnown RBP16.32■□□□□ 0.2
KDM2B-216ENST00000543025 CLCN7P51798 805 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 DGKQP52824 942 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 RPS24P62847 133 aaKnown RBP16.32■□□□□ 0.2
KDM2B-216ENST00000543025 GTF2H2Q13888 395 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 GTF2H2CQ6P1K8 395 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 ADAMTSL2Q86TH1 951 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 STK40Q8N2I9 435 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 NRBF2Q96F24 287 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 B3GALT6Q96L58 329 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 GORASP2Q9H8Y8 452 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 SMPD4Q9NXE4 827 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 IQCF5A8MTL0 148 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 OR7A17O14581 309 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 CLDN11O75508 207 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 RSL1D1O76021 490 aaKnown RBP16.32■□□□□ 0.2
KDM2B-216ENST00000543025 OTCP00480 354 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 MATN1P21941 496 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 SHMT2P34897 504 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 SLC11A2P49281 568 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 NFATC3Q12968 1075 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 ANKDD1AQ495B1 522 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 RFTN2Q52LD8 501 aaPredicted RBP16.32■□□□□ 0.2
KDM2B-216ENST00000543025 RBM48Q5RL73 367 aaKnown RBP16.32■□□□□ 0.2
KDM2B-216ENST00000543025 TAS2R42Q7RTR8 314 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 THAP5Q7Z6K1 395 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 CHCHD4Q8N4Q1 142 aa16.32■□□□□ 0.2
KDM2B-216ENST00000543025 AURKBQ96GD4 344 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms