RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ZNF548Q8NEK5 533 aaPredicted RBP22.67■■□□□ 1.22
HOMER3-205ENST00000542541 CD200R1Q8TD46 325 aa22.67■■□□□ 1.22
HOMER3-205ENST00000542541 ANKRD7Q92527 254 aa22.67■■□□□ 1.22
HOMER3-205ENST00000542541 TCEAL3Q969E4 200 aa22.67■■□□□ 1.22
HOMER3-205ENST00000542541 CAB39LQ9H9S4 337 aa22.67■■□□□ 1.22
HOMER3-205ENST00000542541 SEMA4GQ9NTN9 838 aa22.67■■□□□ 1.22
HOMER3-205ENST00000542541 GALPQ9UBC7 116 aa22.67■■□□□ 1.22
HOMER3-205ENST00000542541 SLC5A10A0PJK1 596 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 GPC4O75487 556 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 CBSLP0DN79 551 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 DGKAP23743 735 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 CBSP35520 551 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 CCT8P50990 548 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 ZKSCAN8Q15776 578 aaPredicted RBP22.66■■□□□ 1.22
HOMER3-205ENST00000542541 SLC30A9Q6PML9 568 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 LVRNQ6Q4G3 990 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 RAPH1Q70E73 1250 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 CCL4L1Q8NHW4 92 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 DPEP2Q9H4A9 486 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 GPAMQ9HCL2 828 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 EURLQ9NYK6 297 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 CTNNAL1Q9UBT7 734 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 LGALS13Q9UHV8 139 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 TLK1Q9UKI8 766 aa22.66■■□□□ 1.22
HOMER3-205ENST00000542541 BPTFQ12830 3046 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 WDR87Q6ZQQ6 2873 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 LNP1A1A4G5 178 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 PRR19A6NJB7 356 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 LMO7DNF2Z398 122 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 EIF3FO00303 357 aaPredicted RBP22.65■■□□□ 1.22
HOMER3-205ENST00000542541 DYNC1I1O14576 645 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 SDC3O75056 442 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 SLCO2B1O94956 709 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 KRT15P19012 456 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 AK4P27144 223 aaPredicted RBP22.65■■□□□ 1.22
HOMER3-205ENST00000542541 EPHA8P29322 1005 aaPredicted RBP22.65■■□□□ 1.22
HOMER3-205ENST00000542541 RGS4P49798 205 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 LRRC8EQ6NSJ5 796 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 PAQR3Q6TCH7 311 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 TIFABQ6ZNK6 161 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 PIM3Q86V86 326 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 NRROSQ86YC3 692 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 CEP97Q8IW35 865 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 GLMNQ92990 594 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 SNX15Q9NRS6 342 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 ST14Q9Y5Y6 855 aa22.65■■□□□ 1.22
HOMER3-205ENST00000542541 GOLGA6L10A6NI86 522 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 ANXA6P08133 673 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 ENO3P13929 434 aaPredicted RBP22.64■■□□□ 1.22
HOMER3-205ENST00000542541 ATP5DP30049 168 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 IL2P60568 153 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 SHBQ15464 509 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 TCEA2Q15560 299 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 WASH2PQ6VEQ5 465 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 NAPRTQ6XQN6 538 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 FAM83HQ6ZRV2 1179 aaPredicted RBP22.64■■□□□ 1.22
HOMER3-205ENST00000542541 NKAPQ8N5F7 415 aaKnown RBP22.64■■□□□ 1.22
HOMER3-205ENST00000542541 MINDY1Q8N5J2 469 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 ISL2Q96A47 359 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 PKNOX2Q96KN3 472 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 IL21RQ9HBE5 538 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 WASH6PQ9NQA3 447 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 TAAR2Q9P1P5 351 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 PCOLCE2Q9UKZ9 415 aa22.64■■□□□ 1.22
HOMER3-205ENST00000542541 PDZK1P1A8MUH7 402 aa22.64■■□□□ 1.21
HOMER3-205ENST00000542541 TPP1O14773 563 aa22.64■■□□□ 1.21
HOMER3-205ENST00000542541 SNX2O60749 519 aa22.64■■□□□ 1.21
HOMER3-205ENST00000542541 MT-ND3P03897 115 aa22.64■■□□□ 1.21
HOMER3-205ENST00000542541 ALDOAP04075 364 aaKnown RBP22.64■■□□□ 1.21
HOMER3-205ENST00000542541 SLC35G4P0C7Q5 338 aa22.64■■□□□ 1.21
HOMER3-205ENST00000542541 ZNF883P0CG24 379 aa22.64■■□□□ 1.21
HOMER3-205ENST00000542541 BNIP3Q12983 259 aa22.64■■□□□ 1.21
HOMER3-205ENST00000542541 TAF1BQ53T94 588 aaPredicted RBP22.64■■□□□ 1.21
HOMER3-205ENST00000542541 CMC1Q7Z7K0 106 aa22.64■■□□□ 1.21
HOMER3-205ENST00000542541 SLC22A15Q8IZD6 547 aa22.64■■□□□ 1.21
HOMER3-205ENST00000542541 LILRA3Q8N6C8 439 aaPredicted RBP22.64■■□□□ 1.21
HOMER3-205ENST00000542541 FAM46DQ8NEK8 389 aa22.64■■□□□ 1.21
HOMER3-205ENST00000542541 GIMAP7Q8NHV1 300 aa22.64■■□□□ 1.21
HOMER3-205ENST00000542541 SLC30A3Q99726 388 aa22.64■■□□□ 1.21
HOMER3-205ENST00000542541 ACOT9Q9Y305 439 aa22.64■■□□□ 1.21
HOMER3-205ENST00000542541 PIKFYVEQ9Y2I7 2098 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 YY2O15391 372 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 RGS16O15492 202 aaPredicted RBP22.63■■□□□ 1.21
HOMER3-205ENST00000542541 PHGDHO43175 533 aaKnown RBP22.63■■□□□ 1.21
HOMER3-205ENST00000542541 PCDHGA12O60330 932 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 MPOP05164 745 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 MYZAPP0CAP1 466 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 SLC2A4P14672 509 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 ZNF37AP17032 561 aaPredicted RBP22.63■■□□□ 1.21
HOMER3-205ENST00000542541 SLC26A3P40879 764 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 HALP42357 657 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 PREPP48147 710 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 NHLH1Q02575 133 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 GBX1Q14549 363 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 SF3A2Q15428 464 aaKnown RBP22.63■■□□□ 1.21
HOMER3-205ENST00000542541 UAP1L1Q3KQV9 507 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 AGAP9Q5VTM2 703 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 SAP25Q8TEE9 199 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 CABS1Q96KC9 395 aa22.63■■□□□ 1.21
HOMER3-205ENST00000542541 PHOX2BQ99453 314 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms