RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SPATA21Q7Z572 469 aa27.33■■□□□ 1.96
CCM2-218ENST00000541586 LINGO1Q96FE5 620 aa27.33■■□□□ 1.96
CCM2-218ENST00000541586 C7orf26Q96N11 449 aa27.33■■□□□ 1.96
CCM2-218ENST00000541586 KCNH6Q9H252 994 aa27.33■■□□□ 1.96
CCM2-218ENST00000541586 TFB2MQ9H5Q4 396 aaKnown RBP27.33■■□□□ 1.96
CCM2-218ENST00000541586 THAP1Q9NVV9 213 aa27.33■■□□□ 1.96
CCM2-218ENST00000541586 KCTD5Q9NXV2 234 aa27.33■■□□□ 1.96
CCM2-218ENST00000541586 POM121BA6NF01 834 aa27.32■■□□□ 1.96
CCM2-218ENST00000541586 ATP5F1P24539 256 aaPredicted RBP27.32■■□□□ 1.96
CCM2-218ENST00000541586 GPR1P46091 355 aa27.32■■□□□ 1.96
CCM2-218ENST00000541586 DPTQ07507 201 aa27.32■■□□□ 1.96
CCM2-218ENST00000541586 OVGP1Q12889 678 aa27.32■■□□□ 1.96
CCM2-218ENST00000541586 OR4D1Q15615 310 aa27.32■■□□□ 1.96
CCM2-218ENST00000541586 NAPRTQ6XQN6 538 aa27.32■■□□□ 1.96
CCM2-218ENST00000541586 DET1Q7L5Y6 550 aa27.32■■□□□ 1.96
CCM2-218ENST00000541586 IKZF3Q9UKT9 509 aa27.32■■□□□ 1.96
CCM2-218ENST00000541586 ERICH4A6NGS2 130 aa27.31■■□□□ 1.96
CCM2-218ENST00000541586 CFAP99D6REC4 459 aa27.31■■□□□ 1.96
CCM2-218ENST00000541586 OR56A5P0C7T3 313 aa27.31■■□□□ 1.96
CCM2-218ENST00000541586 MSH3P20585 1137 aa27.31■■□□□ 1.96
CCM2-218ENST00000541586 IGFALSP35858 605 aa27.31■■□□□ 1.96
CCM2-218ENST00000541586 LDLRAP1Q5SW96 308 aa27.31■■□□□ 1.96
CCM2-218ENST00000541586 PNCKQ6P2M8 343 aa27.31■■□□□ 1.96
CCM2-218ENST00000541586 CACNA2D3Q8IZS8 1091 aa27.31■■□□□ 1.96
CCM2-218ENST00000541586 RHEBL1Q8TAI7 183 aa27.31■■□□□ 1.96
CCM2-218ENST00000541586 KIAA1191Q96A73 305 aa27.31■■□□□ 1.96
CCM2-218ENST00000541586 BMFQ96LC9 184 aa27.31■■□□□ 1.96
CCM2-218ENST00000541586 GATA5Q9BWX5 397 aaPredicted RBP27.31■■□□□ 1.96
CCM2-218ENST00000541586 TM9SF3Q9HD45 589 aa27.31■■□□□ 1.96
CCM2-218ENST00000541586 SPATS2LQ9NUQ6 558 aaKnown RBP27.31■■□□□ 1.96
CCM2-218ENST00000541586 NEMP2A6NFY4 417 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 INPP4BO15327 924 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 BCAT2O15382 392 aaPredicted RBP27.3■■□□□ 1.96
CCM2-218ENST00000541586 ITM2AO43736 263 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 H2AFYO75367 372 aaKnown RBP27.3■■□□□ 1.96
CCM2-218ENST00000541586 SLC1A6P48664 564 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 ZSCAN26Q16670 478 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 ZNF648Q5T619 568 aaPredicted RBP27.3■■□□□ 1.96
CCM2-218ENST00000541586 LAYNQ6UX15 382 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 TMEM145Q8NBT3 493 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 THOC1Q96FV9 657 aaKnown RBP27.3■■□□□ 1.96
CCM2-218ENST00000541586 PANX3Q96QZ0 392 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 CNOT6Q9ULM6 557 aaKnown RBP27.3■■□□□ 1.96
CCM2-218ENST00000541586 OR1A2Q9Y585 309 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 HS3ST3A1Q9Y663 406 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 FANCMQ8IYD8 2048 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 LYPLA1O75608 230 aaPredicted RBP27.3■■□□□ 1.96
CCM2-218ENST00000541586 PRKAA2P54646 552 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 RACK1P63244 317 aaKnown RBP27.3■■□□□ 1.96
CCM2-218ENST00000541586 NLRP8Q86W28 1048 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 ZBTB2Q8N680 514 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 CCDC197Q8NCU1 140 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 DENND6BQ8NEG7 585 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 PDLIM5Q96HC4 596 aaKnown RBP27.3■■□□□ 1.96
CCM2-218ENST00000541586 LATS2Q9NRM7 1088 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 PILRBQ9UKJ0 227 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 PIKFYVEQ9Y2I7 2098 aa27.3■■□□□ 1.96
CCM2-218ENST00000541586 A8MT66 165 aa27.29■■□□□ 1.96
CCM2-218ENST00000541586 F8W8V4 182 aa27.29■■□□□ 1.96
CCM2-218ENST00000541586 CDC7O00311 574 aa27.29■■□□□ 1.96
CCM2-218ENST00000541586 GNSP15586 552 aa27.29■■□□□ 1.96
CCM2-218ENST00000541586 CD38P28907 300 aa27.29■■□□□ 1.96
CCM2-218ENST00000541586 ARRB2P32121 409 aa27.29■■□□□ 1.96
CCM2-218ENST00000541586 TSNQ15631 228 aaKnown RBP27.29■■□□□ 1.96
CCM2-218ENST00000541586 ATG14Q6ZNE5 492 aa27.29■■□□□ 1.96
CCM2-218ENST00000541586 GCNT7Q6ZNI0 430 aa27.29■■□□□ 1.96
CCM2-218ENST00000541586 PHYKPLQ8IUZ5 450 aa27.29■■□□□ 1.96
CCM2-218ENST00000541586 SYT12Q8IV01 421 aa27.29■■□□□ 1.96
CCM2-218ENST00000541586 C1orf216Q8TAB5 229 aa27.29■■□□□ 1.96
CCM2-218ENST00000541586 STAG3L4Q8TBR4 150 aa27.29■■□□□ 1.96
CCM2-218ENST00000541586 ATOH8Q96SQ7 321 aa27.29■■□□□ 1.96
CCM2-218ENST00000541586 ARRDC1-AS1Q9H2J1 176 aa27.29■■□□□ 1.96
CCM2-218ENST00000541586 DNAH14Q0VDD8 3507 aa27.28■■□□□ 1.96
CCM2-218ENST00000541586 NPEPPSL1A6NEC2 478 aa27.28■■□□□ 1.96
CCM2-218ENST00000541586 BTN3A1O00481 513 aa27.28■■□□□ 1.96
CCM2-218ENST00000541586 SGTAO43765 313 aa27.28■■□□□ 1.96
CCM2-218ENST00000541586 MAGEC1O60732 1142 aa27.28■■□□□ 1.96
CCM2-218ENST00000541586 AP2A2O94973 939 aa27.28■■□□□ 1.96
CCM2-218ENST00000541586 CSNK1EP49674 416 aaKnown RBP27.28■■□□□ 1.96
CCM2-218ENST00000541586 NAGLUP54802 743 aa27.28■■□□□ 1.96
CCM2-218ENST00000541586 ABCE1P61221 599 aaKnown RBP27.28■■□□□ 1.96
CCM2-218ENST00000541586 CCDC6Q16204 474 aa27.28■■□□□ 1.96
CCM2-218ENST00000541586 CCDC126Q96EE4 140 aa27.28■■□□□ 1.96
CCM2-218ENST00000541586 NPHS2Q9NP85 383 aa27.28■■□□□ 1.96
CCM2-218ENST00000541586 KERAO60938 352 aa27.27■■□□□ 1.96
CCM2-218ENST00000541586 IPO13O94829 963 aaKnown RBP27.27■■□□□ 1.96
CCM2-218ENST00000541586 TGDSO95455 350 aa27.27■■□□□ 1.96
CCM2-218ENST00000541586 DNAJB13P59910 316 aa27.27■■□□□ 1.96
CCM2-218ENST00000541586 Q6ZSR6 202 aa27.27■■□□□ 1.96
CCM2-218ENST00000541586 EXT2Q93063 718 aa27.27■■□□□ 1.96
CCM2-218ENST00000541586 MOCOSQ96EN8 888 aa27.27■■□□□ 1.96
CCM2-218ENST00000541586 CYP4F12Q9HCS2 524 aa27.27■■□□□ 1.96
CCM2-218ENST00000541586 ACSS2Q9NR19 701 aa27.27■■□□□ 1.96
CCM2-218ENST00000541586 KLHL42Q9P2K6 505 aa27.27■■□□□ 1.96
CCM2-218ENST00000541586 RAPGEFL1Q9UHV5 662 aa27.27■■□□□ 1.96
CCM2-218ENST00000541586 TMEM114B3SHH9 223 aa27.27■■□□□ 1.96
CCM2-218ENST00000541586 TROVE2P10155 538 aaKnown RBP eCLIP27.27■■□□□ 1.96
CCM2-218ENST00000541586 DGKAP23743 735 aa27.27■■□□□ 1.96
CCM2-218ENST00000541586 CCR7P32248 378 aa27.27■■□□□ 1.96
CCM2-218ENST00000541586 ASPHQ12797 758 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms