RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 FNDC5Q8NAU1 212 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 OR4F6Q8NGB9 312 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 TTLL2Q9BWV7 592 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 SEPT3Q9UH03 358 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 MAGEL2Q9UJ55 1249 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 NAALAD2Q9Y3Q0 740 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 PCDHGC4Q9Y5F7 938 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 SYN3O14994 580 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 ACSL4O60488 711 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 TLR5O60602 858 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 FLT3LGP49771 235 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 PWP1Q13610 501 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 RBBP7Q16576 425 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 ZIK1Q3SY52 487 aaPredicted RBP9.39□□□□□ -0.91
CNOT4-212ENST00000541284 PRR23BQ6ZRT6 265 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 SLC16A12Q6ZSM3 486 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 EFL1Q7Z2Z2 1120 aaKnown RBP9.39□□□□□ -0.91
CNOT4-212ENST00000541284 CROCCP3Q8IVE0 287 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 HS3ST5Q8IZT8 346 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 GTF2H4Q92759 462 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 VPS50Q96JG6 964 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 RNF145Q96MT1 663 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 GORASP2Q9H8Y8 452 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 TBCCD1Q9NVR7 557 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 PAK1IP1Q9NWT1 392 aaPredicted RBP9.39□□□□□ -0.91
CNOT4-212ENST00000541284 DYTNA2CJ06 578 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 NDUFS3O75489 264 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 GJB5O95377 273 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 LPOP22079 712 aaPredicted RBP9.39□□□□□ -0.91
CNOT4-212ENST00000541284 OR1G1P47890 313 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 FCGRTP55899 365 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 PRKG2Q13237 762 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 ACBD5Q5T8D3 534 aaPredicted RBP9.39□□□□□ -0.91
CNOT4-212ENST00000541284 RNF165Q6ZSG1 346 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 OR8J3Q8NGG0 315 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 FBLIM1Q8WUP2 373 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 GFM2Q969S9 779 aaKnown RBP9.39□□□□□ -0.91
CNOT4-212ENST00000541284 LHPPQ9H008 270 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 ELAC1Q9H777 363 aaKnown RBP9.39□□□□□ -0.91
CNOT4-212ENST00000541284 BPIFA1Q9NP55 256 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 NUDT4Q9NZJ9 180 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 TMEM9Q9P0T7 183 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 LHX3Q9UBR4 397 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 UBA2Q9UBT2 640 aaPredicted RBP9.39□□□□□ -0.91
CNOT4-212ENST00000541284 TDRKHQ9Y2W6 561 aaKnown RBP9.39□□□□□ -0.91
CNOT4-212ENST00000541284 COL4A2P08572 1712 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 SPTBN5Q9NRC6 3674 aaKnown RBP9.38□□□□□ -0.91
CNOT4-212ENST00000541284 KANSL1LA0AUZ9 987 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 ANKRD66B4E2M5 251 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 GFRA2O00451 464 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 ZSCAN9O15535 394 aaPredicted RBP9.38□□□□□ -0.91
CNOT4-212ENST00000541284 TULP3O75386 442 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 EOMESO95936 686 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 CXCL10P02778 98 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 CNPP09543 421 aaKnown RBP9.38□□□□□ -0.91
CNOT4-212ENST00000541284 LINC00271P0C7V0 271 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 RAP2AP10114 183 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 TTKP33981 857 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 ESRRGP62508 458 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 BNIP3Q12983 259 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 AQP6Q13520 282 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 C16orf72Q14CZ0 275 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 NEDD8Q15843 81 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 CTXN3Q4LDR2 81 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 ZC3H7AQ8IWR0 971 aaKnown RBP9.38□□□□□ -0.91
CNOT4-212ENST00000541284 LEMD2Q8NC56 503 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 CHDHQ8NE62 594 aaPredicted RBP9.38□□□□□ -0.91
CNOT4-212ENST00000541284 LPCAT1Q8NF37 534 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 OSBPL10Q9BXB5 764 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 TOR3AQ9H497 397 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 ARIH1Q9Y4X5 557 aaPredicted RBP9.38□□□□□ -0.91
CNOT4-212ENST00000541284 PCDHGA8Q9Y5G5 932 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 RAI2Q9Y5P3 530 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 F5H5T6 163 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 VPS26AO75436 327 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 HPRP00739 348 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 COL6A1P12109 1028 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 CKBP12277 381 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 IL7RP16871 459 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 ZNF182P17025 639 aaPredicted RBP9.38□□□□□ -0.91
CNOT4-212ENST00000541284 ACVR2AP27037 513 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 PTPN6P29350 595 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 CDH4P55283 916 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 IL2P60568 153 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 PHC1P78364 1004 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 AASDHQ4L235 1098 aaPredicted RBP9.38□□□□□ -0.91
CNOT4-212ENST00000541284 ATP6AP1LQ52LC2 224 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 OR52E4Q8NGH9 312 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 PNPT1Q8TCS8 783 aaKnown RBP9.38□□□□□ -0.91
CNOT4-212ENST00000541284 PPP1R14BQ96C90 147 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 NSMCE2Q96MF7 247 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 SMURF2Q9HAU4 748 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 FANCEQ9HB96 536 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 FARSBQ9NSD9 589 aaKnown RBP9.38□□□□□ -0.91
CNOT4-212ENST00000541284 USE1Q9NZ43 259 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 IL17CQ9P0M4 197 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 TRMT6Q9UJA5 497 aaKnown RBP9.38□□□□□ -0.91
CNOT4-212ENST00000541284 DHRS7Q9Y394 339 aa9.38□□□□□ -0.91
CNOT4-212ENST00000541284 POLR3HQ9Y535 204 aaPredicted RBP9.38□□□□□ -0.91
CNOT4-212ENST00000541284 CHD7Q9P2D1 2997 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms