RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 TRABD2AQ86V40 505 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 DCP2Q8IU60 420 aaKnown RBP9.17□□□□□ -0.94
DDX55-208ENST00000541259 GALNT13Q8IUC8 556 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 SYT12Q8IV01 421 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 VRK3Q8IV63 474 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 CFAP206Q8IYR0 622 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 SPATA6LQ8N4H0 392 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 CCL4L1Q8NHW4 92 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 EEF1AKMT1Q8WVE0 214 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 ANKRD49Q8WVL7 239 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 ELMO1Q92556 727 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 KCNJ9Q92806 393 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 INPP5DQ92835 1189 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 ISL2Q96A47 359 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 MTBPQ96DY7 904 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 PGM2Q96G03 612 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 ZNF514Q96K75 400 aaPredicted RBP9.17□□□□□ -0.94
DDX55-208ENST00000541259 LINC00615Q96LM1 132 aaPredicted RBP9.17□□□□□ -0.94
DDX55-208ENST00000541259 UNKQ9C0B0 810 aaKnown RBP9.17□□□□□ -0.94
DDX55-208ENST00000541259 TMEM168Q9H0V1 697 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 ARRDC1-AS1Q9H2J1 176 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 SMOC1Q9H4F8 434 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 RMI1Q9H9A7 625 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 GPAMQ9HCL2 828 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 LATS2Q9NRM7 1088 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 KLC4Q9NSK0 619 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 SPATS2LQ9NUQ6 558 aaKnown RBP9.17□□□□□ -0.94
DDX55-208ENST00000541259 TAS2R13Q9NYV9 303 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 TRMT6Q9UJA5 497 aaKnown RBP9.17□□□□□ -0.94
DDX55-208ENST00000541259 NOVA2Q9UNW9 492 aaKnown RBP9.17□□□□□ -0.94
DDX55-208ENST00000541259 CDYLQ9Y232 598 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 KCNK6Q9Y257 313 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 ANKRD6Q9Y2G4 727 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 DNAJC16Q9Y2G8 782 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 DHRS7Q9Y394 339 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 SNX11Q9Y5W9 270 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 WDR87Q6ZQQ6 2873 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 MUC6Q6W4X9 2439 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 A0A096LPK6 155 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 SLC5A10A0PJK1 596 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 MGAT4DA6NG13 374 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 PRR5-ARHGAP8B1AHC4 643 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 GPR89AB7ZAQ6 455 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 QSOX1O00391 747 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 ATP8B1O43520 1251 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 SPAG7O75391 227 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 GPC4O75487 556 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 EPN2O95208 641 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 RASGRP1O95267 797 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 TNFP01375 233 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 CELA2BP08218 269 aaPredicted RBP9.16□□□□□ -0.94
DDX55-208ENST00000541259 GPR89BP0CG08 455 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 GNSP15586 552 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 CD9P21926 228 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 AK4P27144 223 aaPredicted RBP9.16□□□□□ -0.94
DDX55-208ENST00000541259 CRABP2P29373 138 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 PDHA2P29803 388 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 CTSKP43235 329 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 PREPP48147 710 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 HK3P52790 923 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 C21orf59P57076 290 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 CTBSQ01459 385 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 HSPA14Q0VDF9 509 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 OVGP1Q12889 678 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 DNAJC3Q13217 504 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 C1orf61Q13536 156 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 BOP1Q14137 746 aaKnown RBP9.16□□□□□ -0.94
DDX55-208ENST00000541259 TEAD4Q15561 434 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 INSCQ1MX18 579 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 PLA2G2CQ5R387 149 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 CYHR1Q6ZMK1 362 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 OTOAQ7RTW8 1153 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 CROCCP2Q86T23 111 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 EXOC3L1Q86VI1 746 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 AMZ2Q86W34 360 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 PARGQ86W56 976 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 NRROSQ86YC3 692 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 SRRM1Q8IYB3 904 aaKnown RBP9.16□□□□□ -0.94
DDX55-208ENST00000541259 CPNE9Q8IYJ1 553 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 PHACTR4Q8IZ21 702 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 C4orf33Q8N1A6 199 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 PLD6Q8N2A8 252 aaKnown RBP9.16□□□□□ -0.94
DDX55-208ENST00000541259 OXR1Q8N573 874 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 ZBTB2Q8N680 514 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 SUMF1Q8NBK3 374 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 OR2L2Q8NH16 312 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 KCTD4Q8WVF5 259 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 TSPAN17Q96FV3 270 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 PANX3Q96QZ0 392 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 OR2M4Q96R27 311 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 ARHGAP9Q9BRR9 750 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 SLC13A1Q9BZW2 595 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 VPS11Q9H270 941 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 C12orf65Q9H3J6 166 aaKnown RBP9.16□□□□□ -0.94
DDX55-208ENST00000541259 PCMTD2Q9NV79 361 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 FAM86C1Q9NVL1 165 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 ZNF358Q9NW07 568 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 DNAJC28Q9NX36 388 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 IKZF3Q9UKT9 509 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 DNMT3AQ9Y6K1 912 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms