RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 COQ10AQ96MF6 247 aa8.72□□□□□ -1.01
TRAPPC1-202ENST00000540486 ALS2CR12Q96Q35 445 aa8.72□□□□□ -1.01
TRAPPC1-202ENST00000540486 VAT1Q99536 393 aa8.72□□□□□ -1.01
TRAPPC1-202ENST00000540486 ULBP3Q9BZM4 244 aa8.72□□□□□ -1.01
TRAPPC1-202ENST00000540486 APMAPQ9HDC9 416 aa8.72□□□□□ -1.01
TRAPPC1-202ENST00000540486 ATP13A2Q9NQ11 1180 aa8.72□□□□□ -1.01
TRAPPC1-202ENST00000540486 SPATS2LQ9NUQ6 558 aaKnown RBP8.72□□□□□ -1.01
TRAPPC1-202ENST00000540486 TMEM9Q9P0T7 183 aa8.72□□□□□ -1.01
TRAPPC1-202ENST00000540486 KLHL8Q9P2G9 620 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC1-202ENST00000540486 TRHDEQ9UKU6 1024 aa8.72□□□□□ -1.01
TRAPPC1-202ENST00000540486 DNPEPQ9ULA0 475 aa8.72□□□□□ -1.01
TRAPPC1-202ENST00000540486 OR1A2Q9Y585 309 aa8.72□□□□□ -1.01
TRAPPC1-202ENST00000540486 CROCCQ5TZA2 2017 aa8.71□□□□□ -1.01
TRAPPC1-202ENST00000540486 A0A1B0GUH1 482 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 FAM221AA4D161 298 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 GOLGA6L9A6NEM1 432 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 C5orf60A6NFR6 353 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 C21orf140B9A014 251 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 F5H423 210 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 CACNB4O00305 520 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 PPM1DO15297 605 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 PMPCBO75439 489 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 CLDN7O95471 211 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 ECEL1O95672 775 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 HOXC4P09017 264 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 CD99P14209 185 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 COX6B1P14854 86 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 VIPR1P32241 457 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 KIAA1024LP59773 190 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 RPL26P61254 145 aaKnown RBP8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 MTM1Q13496 603 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 DNASE1L3Q13609 305 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 GALNT3Q14435 633 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 OASLQ15646 514 aaKnown RBP8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 PCSK7Q16549 785 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 UGT8Q16880 541 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 PLEKHN1Q494U1 663 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 SEL1L2Q5TEA6 688 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 WDR74Q6RFH5 385 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 Q6ZVL8 140 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 CDH24Q86UP0 819 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 SLC35F6Q8N357 371 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 PAF1Q8N7H5 531 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 LPCAT1Q8NF37 534 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 CCL4L1Q8NHW4 92 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 CCDC110Q8TBZ0 833 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 C1orf54Q8WWF1 131 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 ATG4AQ8WYN0 398 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 STAMBPL1Q96FJ0 436 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 AHCYL2Q96HN2 611 aaKnown RBP8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 LYSMD1Q96S90 227 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 TMEM121Q9BTD3 319 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 MLPHQ9BV36 600 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 ZMYND15Q9H091 742 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 HAUS2Q9NVX0 235 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 FAM153AQ9UHL3 310 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 PADI1Q9ULC6 663 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 RPL26L1Q9UNX3 145 aaKnown RBP8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 JRKLQ9Y4A0 524 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 COPG1Q9Y678 874 aaKnown RBP8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 DCHS2Q6V1P9 2916 aa8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 TNRC6AQ8NDV7 1962 aaKnown RBP8.71□□□□□ -1.02
TRAPPC1-202ENST00000540486 TMEM202A6NGA9 273 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 A8MU76 341 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 PSMD11O00231 422 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 AURKAO14965 403 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 LIASO43766 372 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 PRICKLE3O43900 615 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 CEP104O60308 925 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 METTL18O95568 372 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 AGTP01019 485 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 EPOP01588 193 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 FGGP02679 453 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 MT-ND3P03897 115 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 ATP1A1P05023 1023 aaKnown RBP8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 ELFN1P0C7U0 828 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 CYP2A6P11509 494 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 STIP1P31948 543 aaKnown RBP8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 TRIM23P36406 574 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 ETV3P41162 512 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 CHRNA4P43681 627 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 EPHB1P54762 984 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 WNT3AP56704 352 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 MSLNQ13421 630 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 OLIG2Q13516 323 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 ACOX1Q15067 660 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 SLC14A2Q15849 920 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 CCNG2Q16589 344 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 KCTD19Q17RG1 926 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 SNAP47Q5SQN1 464 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 LRRC66Q68CR7 880 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 DENND2CQ68D51 928 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 KCTD16Q68DU8 428 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 PNCKQ6P2M8 343 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 RANBP10Q6VN20 620 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 USP45Q70EL2 814 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 TRIM46Q7Z4K8 759 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 TMC3Q7Z5M5 1100 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 PRUNE1Q86TP1 453 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 CDKL3Q8IVW4 592 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms