RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 DESI1Q6ICB0 168 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 SPESP1Q6UW49 350 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 EFL1Q7Z2Z2 1120 aaKnown RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 CADM2Q8N3J6 435 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 CPSF7Q8N684 471 aaKnown RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 C1orf127Q8N9H9 656 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 OR52K1Q8NGK4 314 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 JPH3Q8WXH2 748 aaPredicted RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 ROPN1LQ96C74 230 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 DOK1Q99704 481 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 RHOBTB2Q9BYZ6 727 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 FZD8Q9H461 694 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 CHRAC1Q9NRG0 131 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 UBP1Q9NZI7 540 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 GMEB2Q9UKD1 530 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 PCDHGA11Q9Y5H2 935 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 SCN10AQ9Y5Y9 1956 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 A0A0A0MRY4 1105 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 A0A1W2PQ67 120 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 TSPAN4O14817 238 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 MTHFD1P11586 935 aaKnown RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 NCK1P16333 377 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 POU3F3P20264 500 aaPredicted RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 GTF2E2P29084 291 aaKnown RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 CD40LGP29965 261 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 HTR2BP41595 481 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 ATXN1P54253 815 aaKnown RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 GPNMBQ14956 572 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 VPS26BQ4G0F5 336 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 SLC39A12Q504Y0 691 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 KDELC2Q7Z4H8 507 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 ZNF540Q8NDQ6 660 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 SETD9Q8NE22 299 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 MCOLN3Q8TDD5 553 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 FEM1CQ96JP0 617 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 HSFY1Q96LI6 401 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 SPATA13Q96N96 652 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 IL12RB2Q99665 862 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 ZNF670Q9BS34 389 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 GPR62Q9BZJ7 368 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 CWH43Q9H720 699 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 KAT8Q9H7Z6 458 aaKnown RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 KIF17Q9P2E2 1029 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 KIAA1257Q9ULG3 409 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 LOC110117498-PIK3R3F6TDL0 507 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 H0YAE9 185 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 FGF19O95750 216 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 INHBBP09529 407 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 BMP4P12644 408 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 GOT1P17174 413 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 GABRR2P28476 465 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 GDI1P31150 447 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 RRM2P31350 389 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 CDH5P33151 784 aaPredicted RBP8.57□□□□□ -1.04
DDB1-217ENST00000540166 NR2C2P49116 596 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 CTBSQ01459 385 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 BST2Q10589 180 aaKnown RBP8.57□□□□□ -1.04
DDB1-217ENST00000540166 DUSP4Q13115 394 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 DAG1Q14118 895 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 CSHL1Q14406 222 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 MEP1AQ16819 746 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 CCDC142Q17RM4 750 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 ZNF181Q2M3W8 571 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 MRPL10Q7Z7H8 261 aaKnown RBP8.57□□□□□ -1.04
DDB1-217ENST00000540166 SPATA6LQ8N4H0 392 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 OR9I1Q8NGQ6 314 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 NXPE3Q969Y0 559 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 ZUFSPQ96AP4 578 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 PIWIL1Q96J94 861 aaKnown RBP8.57□□□□□ -1.04
DDB1-217ENST00000540166 ZNF641Q96N77 438 aaPredicted RBP8.57□□□□□ -1.04
DDB1-217ENST00000540166 NELL2Q99435 816 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 DSN1Q9H410 356 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 ASB7Q9H672 318 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 EXOSC4Q9NPD3 245 aaKnown RBP8.57□□□□□ -1.04
DDB1-217ENST00000540166 COMMD8Q9NX08 183 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 TRPM5Q9NZQ8 1165 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 UXTQ9UBK9 157 aaPredicted RBP8.57□□□□□ -1.04
DDB1-217ENST00000540166 CACNG4Q9UBN1 327 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 VPS4AQ9UN37 437 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 BBIP1A8MTZ0 92 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 EFCAB9A8MZ26 197 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 ZBTB42B2RXF5 422 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 G3V2T6 193 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 ARPC2O15144 300 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 CILPO75339 1184 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 SEC14L2O76054 403 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 ANGPTL1O95841 491 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 FADS2O95864 444 aaKnown RBP8.57□□□□□ -1.04
DDB1-217ENST00000540166 MLNP12872 115 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 SLC26A3P40879 764 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 TWF1Q12792 350 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 TRIP4Q15650 581 aaPredicted RBP8.57□□□□□ -1.04
DDB1-217ENST00000540166 HMBOX1Q6NT76 420 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 CYP20A1Q6UW02 462 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 EID3Q8N140 333 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 TMEM130Q8N3G9 435 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 NATD1Q8N6N6 113 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 VN1R2Q8NFZ6 395 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 ZBP1Q9H171 429 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 MOCS1Q9NZB8 636 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms