RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ITGB3P05106 788 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 KRT19P08727 400 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 SLC35E2BP0CK96 405 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 GLULP15104 373 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 STMN1P16949 149 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 CKMT2P17540 419 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 GPX3P22352 226 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 JAK1P23458 1154 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 MAP4P27816 1152 aaKnown RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 PSMB4P28070 264 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 RAP1GAPP47736 663 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 LEPRP48357 1165 aaKnown RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 SCNN1GP51170 649 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 HNRNPFP52597 415 aaKnown RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 CDH15P55291 814 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 STX1BP61266 288 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 BST2Q10589 180 aaKnown RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 SCAPQ12770 1279 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 CDC20Q12834 499 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 TUSC3Q13454 348 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 SQSTM1Q13501 440 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 GRM3Q14832 879 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 NR1D2Q14995 579 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 INAQ16352 499 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 CLPPQ16740 277 aaPredicted RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 CDO1Q16878 200 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 RSPO4Q2I0M5 234 aaPredicted RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 FAM83EQ2M2I3 478 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 RAB6CQ53S08 254 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 CYBRD1Q53TN4 286 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 AGAP9Q5VTM2 703 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 GPR107Q5VW38 600 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 TTC23Q5W5X9 447 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 TMEM198Q66K66 360 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 NEPROQ6NW34 567 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 PKN3Q6P5Z2 889 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 SLC27A1Q6PCB7 646 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 GET4Q7L5D6 327 aaPredicted RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 PROSER1Q86XN7 944 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 ADGRG5Q8IZF4 528 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 CENPLQ8N0S6 344 aaPredicted RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 CLYBLQ8N0X4 340 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 AADATQ8N5Z0 425 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 PCDH20Q8N6Y1 951 aaKnown RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 LRRC52Q8N7C0 313 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 BEST2Q8NFU1 509 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 OR52K1Q8NGK4 314 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 RNF139Q8WU17 664 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 C17orf50Q8WW18 174 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 HDAC2Q92769 488 aaKnown RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 TANKQ92844 425 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 DNASE1L2Q92874 299 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 FGF14Q92915 247 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 GTPBP3Q969Y2 492 aaKnown RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 ZNF837Q96EG3 531 aaPredicted RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 TSPAN17Q96FV3 270 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 AURKBQ96GD4 344 aaPredicted RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 SCYL1Q96KG9 808 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 PPP1R10Q96QC0 940 aaKnown RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 CTRCQ99895 268 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 BDH2Q9BUT1 245 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 TRIM54Q9BYV2 358 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 GPR62Q9BZJ7 368 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 RAB6CQ9H0N0 254 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 PCDHAC1Q9H158 963 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 GBA3Q9H227 469 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 SEMA6AQ9H2E6 1030 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 RAD21L1Q9H4I0 556 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 TMEM165Q9HC07 324 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 MOV10Q9HCE1 1003 aaKnown RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 LTB4R2Q9NPC1 389 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 NCDNQ9UBB6 729 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 PACSIN3Q9UKS6 424 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 SLC39A10Q9ULF5 831 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 AAR2Q9Y312 384 aaKnown RBP7.57□□□□□ -1.2
CCDC60-204ENST00000539847 PCDHGB1Q9Y5G3 927 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 SNX9Q9Y5X1 595 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 CPQQ9Y646 472 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 CACNA1GO43497 2377 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 A0A1W2PPW3 197 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 METTL12A8MUP2 240 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 TMEM189-UBE2V1I3L0A0 370 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 INO80B-WBP1J3KQ70 363 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 UBXN8O00124 270 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 NEMP1O14524 444 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 PFDN6O15212 129 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 PHGDHO43175 533 aaKnown RBP7.56□□□□□ -1.2
CCDC60-204ENST00000539847 AQP9O43315 295 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 TULP3O75386 442 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 PAGE1O75459 146 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 DAB1O75553 588 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 TIPRLO75663 272 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 IPO13O94829 963 aaKnown RBP7.56□□□□□ -1.2
CCDC60-204ENST00000539847 MAP3K6O95382 1288 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 LDLRP01130 860 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 AHSGP02765 367 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 S100BP04271 92 aaPredicted RBP7.56□□□□□ -1.2
CCDC60-204ENST00000539847 GFAPP14136 432 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 CD1EP15812 388 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 ARF4P18085 180 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms