RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 KEAP1Q14145 624 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 ZMYND11Q15326 602 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 DCP1BQ8IZD4 617 aaKnown RBP12.26□□□□□ -0.45
USP3-203ENST00000538686 MIER2Q8N344 545 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 STX19Q8N4C7 294 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 ZNF557Q8N988 423 aaPredicted RBP12.26□□□□□ -0.45
USP3-203ENST00000538686 TEX47Q8TBZ9 253 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 LPAR1Q92633 364 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 MRPL57Q9BQC6 102 aaKnown RBP12.26□□□□□ -0.45
USP3-203ENST00000538686 C1QTNF1Q9BXJ1 281 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 EVA1BQ9NVM1 165 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 TBX20Q9UMR3 447 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 IGLV3-22A0A075B6J6 115 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 TMEM233B4DJY2 109 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 TARM1B6A8C7 271 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 NT5C1B-RDH14C9J2C7 533 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 KPNA5O15131 536 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 DLX3O60479 287 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 TNFRSF21O75509 655 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 TP53P04637 393 aaPredicted RBP12.26□□□□□ -0.45
USP3-203ENST00000538686 CLEC2LP0C7M8 214 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 CYP2C8P10632 490 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 EFNA1P20827 205 aaPredicted RBP12.26□□□□□ -0.45
USP3-203ENST00000538686 CSRP3P50461 194 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 TRIM60Q495X7 471 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 HSD17B12Q53GQ0 312 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 RUNDC3AQ59EK9 446 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 FAM26DQ5JW98 314 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 SUSD4Q5VX71 490 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 GPR139Q6DWJ6 353 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 RRM2BQ7LG56 351 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 ZC3HC1Q86WB0 502 aaKnown RBP12.26□□□□□ -0.45
USP3-203ENST00000538686 ARNTL2Q8WYA1 636 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 YIPF5Q969M3 257 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 AKT1S1Q96B36 256 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 KLHL15Q96M94 604 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 FOPNLQ96NB1 174 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 PRRG3Q9BZD7 231 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 SHARPINQ9H0F6 387 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 MMP28Q9H239 520 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 IL1RL2Q9HB29 575 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 COL18A1P39060 1754 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 POLRMTO00411 1230 aaKnown RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 KHNYNO15037 678 aaKnown RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 SEC14L5O43304 696 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 GATCO43716 136 aaKnown RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 SSX5O60225 188 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 ERN1O75460 977 aaKnown RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 CELF2O95319 508 aaKnown RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 NPPAP01160 153 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 TNNC2P02585 160 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 TPOP07202 933 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 SBK3P0C264 359 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 MGAT1P26572 445 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 TGFBR1P36897 503 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 HSD17B2P37059 387 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.25□□□□□ -0.453e-7■■■■□ 20.8
USP3-203ENST00000538686 GRAPQ13588 217 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 GPR19Q15760 415 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 TIMM50Q3ZCQ8 353 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 PYCR3Q53H96 274 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 MPP7Q5T2T1 576 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 MAP1SQ66K74 1059 aaPredicted RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 CNSTQ6PJW8 725 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 LARP4Q71RC2 724 aaKnown RBP eCLIP12.25□□□□□ -0.45
USP3-203ENST00000538686 OR9I1Q8NGQ6 314 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 CNIH3Q8TBE1 160 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 COPS5Q92905 334 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 POP5Q969H6 163 aaKnown RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 AMNQ9BXJ7 453 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 PCDHB5Q9Y5E4 795 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 U3KQV3 271 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 IRS2Q9Y4H2 1338 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 OR6C65A6NJZ3 312 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 KRBOX1C9JBD0 128 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 FAM20BO75063 409 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 C4BPAP04003 597 aaKnown RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 RAF1P04049 648 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 ALAS2P22557 587 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 GADD45AP24522 165 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 ATP5F1P24539 256 aaPredicted RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 SDC4P31431 198 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 EN1Q05925 392 aaPredicted RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 CDH17Q12864 832 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 ZNF169Q14929 603 aaPredicted RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 TBCEQ15813 527 aaPredicted RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 SLC35F1Q5T1Q4 408 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 HEATR6Q6AI08 1181 aaKnown RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 CAPN13Q6MZZ7 669 aaPredicted RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 SLC46A3Q7Z3Q1 461 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 KRT73Q86Y46 540 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 DNERQ8NFT8 737 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 OR5K1Q8NHB7 308 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 ITFG1Q8TB96 612 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 RNF34Q969K3 372 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 ELMO3Q96BJ8 720 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 WDFY2Q96P53 400 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 CGRRF1Q99675 332 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 GPR22Q99680 433 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms