RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 SLC17A4Q9Y2C5 497 aa12.12□□□□□ -0.47
DDB1-209ENST00000537877 TMEM98Q9Y2Y6 226 aa12.12□□□□□ -0.47
DDB1-209ENST00000537877 DOCK9Q9BZ29 2069 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 CCDC163A0A0D9SF12 145 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 A0A1W2PPC4 97 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 POM121BA6NF01 834 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 MGAT4DA6NG13 374 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 TMEM114B3SHH9 223 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 SUPT3HB4E1H0 165 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 SLC16A5O15375 505 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 GRID2O43424 1007 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 EDF1O60869 148 aaKnown RBP12.11□□□□□ -0.47
DDB1-209ENST00000537877 SUPT3HO75486 399 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 FAM107AO95990 144 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 ENO2P09104 434 aaPredicted RBP12.11□□□□□ -0.47
DDB1-209ENST00000537877 MTHFD2P13995 350 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 HTR1BP28222 390 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 PBLDP30039 288 aaPredicted RBP12.11□□□□□ -0.47
DDB1-209ENST00000537877 SERPINB5P36952 375 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 RABIFP47224 123 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 ARHGAP8P85298 464 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 BST1Q10588 318 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 RPA4Q13156 261 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 STX3Q13277 289 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 TERF2Q15554 542 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 PPP1R3AQ16821 1122 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 USP39Q53GS9 565 aaKnown RBP12.11□□□□□ -0.47
DDB1-209ENST00000537877 SBSNQ6UWP8 590 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 NAPRTQ6XQN6 538 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 RAB44Q7Z6P3 723 aaPredicted RBP12.11□□□□□ -0.47
DDB1-209ENST00000537877 ABI3BPQ7Z7G0 1075 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 C11orf96Q7Z7L8 435 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 SLC22A15Q8IZD6 547 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 RLN3Q8WXF3 142 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 EXT2Q93063 718 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 SCARF2Q96GP6 870 aaPredicted RBP12.11□□□□□ -0.47
DDB1-209ENST00000537877 BMFQ96LC9 184 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 C7orf26Q96N11 449 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 TIMM29Q9BSF4 260 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 DPEP2Q9H4A9 486 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 RDH14Q9HBH5 336 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.11□□□□□ -0.47
DDB1-209ENST00000537877 OARD1Q9Y530 152 aa12.11□□□□□ -0.47
DDB1-209ENST00000537877 TMEM202A6NGA9 273 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 STX16-NPEPL1H3BU86 382 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 UBXN8O00124 270 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 STX16O14662 325 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 TNFRSF10CO14798 259 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 KLK8O60259 260 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 NPHS1O60500 1241 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 KCNJ13O60928 360 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 SNNO75324 88 aaPredicted RBP12.1□□□□□ -0.47
DDB1-209ENST00000537877 POP7O75817 140 aaKnown RBP12.1□□□□□ -0.47
DDB1-209ENST00000537877 SNUPNO95149 360 aaKnown RBP12.1□□□□□ -0.47
DDB1-209ENST00000537877 PDGFBP01127 241 aaPredicted RBP12.1□□□□□ -0.47
DDB1-209ENST00000537877 S100BP04271 92 aaPredicted RBP12.1□□□□□ -0.47
DDB1-209ENST00000537877 CEACAM5P06731 702 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 GFAPP14136 432 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 VCLP18206 1134 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 DRD4P21917 467 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 KCNC1P48547 511 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 PXNP49023 591 aaPredicted RBP12.1□□□□□ -0.47
DDB1-209ENST00000537877 CLDN2P57739 230 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 NAA20P61599 178 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 DMPKQ09013 629 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 TGFBIQ15582 683 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 CDKL4Q5MAI5 379 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 ZCCHC23Q6ZST2 131 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 FAM47EQ6ZV65 393 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 CPLX4Q7Z7G2 160 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 AMZ2Q86W34 360 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 GALNT13Q8IUC8 556 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 RASGRP3Q8IV61 690 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 VRK3Q8IV63 474 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 FBXO39Q8N4B4 442 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 FAM160A2Q8N612 972 aaPredicted RBP12.1□□□□□ -0.47
DDB1-209ENST00000537877 OR56A4Q8NGH8 313 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 GRAMD1AQ96CP6 724 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 L3HYPDHQ96EM0 354 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 WDR92Q96MX6 357 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 UHRF1Q96T88 793 aaPredicted RBP12.1□□□□□ -0.47
DDB1-209ENST00000537877 GATA5Q9BWX5 397 aaPredicted RBP12.1□□□□□ -0.47
DDB1-209ENST00000537877 PITPNM3Q9BZ71 974 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 EBF2Q9HAK2 575 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 PRMT8Q9NR22 394 aaPredicted RBP12.1□□□□□ -0.47
DDB1-209ENST00000537877 FGFR1OP2Q9NVK5 253 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 THAP1Q9NVV9 213 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 SPATA6Q9NWH7 488 aaPredicted RBP12.1□□□□□ -0.47
DDB1-209ENST00000537877 NCKIPSDQ9NZQ3 722 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 GULP1Q9UBP9 304 aa12.1□□□□□ -0.47
DDB1-209ENST00000537877 TSR3Q9UJK0 312 aaKnown RBP12.1□□□□□ -0.47
DDB1-209ENST00000537877 PRSS38A1L453 326 aa12.09□□□□□ -0.47
DDB1-209ENST00000537877 PABPN1LA6NDY0 278 aaKnown RBP12.09□□□□□ -0.47
DDB1-209ENST00000537877 NEMP2A6NFY4 417 aa12.09□□□□□ -0.47
DDB1-209ENST00000537877 METTL12A8MUP2 240 aa12.09□□□□□ -0.47
DDB1-209ENST00000537877 H0Y8X5 98 aa12.09□□□□□ -0.47
DDB1-209ENST00000537877 H3BM21 787 aa12.09□□□□□ -0.47
DDB1-209ENST00000537877 GFYI3L273 518 aa12.09□□□□□ -0.47
DDB1-209ENST00000537877 SNX2O60749 519 aa12.09□□□□□ -0.47
DDB1-209ENST00000537877 MATN4O95460 622 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms