RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 HAUS1Q96CS2 278 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 COX14Q96I36 57 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 HIC2Q96JB3 615 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 TEKT5Q96M29 485 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 OR2M4Q96R27 311 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 WDR24Q96S15 920 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 AGAP2Q99490 1192 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 RIOK2Q9BVS4 552 aaKnown RBP6.97□□□□□ -1.29
YBX3-206ENST00000536823 GSDMCQ9BYG8 508 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 CDH19Q9H159 772 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 SYNDIG1Q9H7V2 258 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 POLR1BQ9H9Y6 1135 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 PKD2L2Q9NZM6 624 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 TAAR2Q9P1P5 351 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 NFKBIL1Q9UBC1 381 aaPredicted RBP6.97□□□□□ -1.29
YBX3-206ENST00000536823 SAE1Q9UBE0 346 aaPredicted RBP6.97□□□□□ -1.29
YBX3-206ENST00000536823 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.97□□□□□ -1.29
YBX3-206ENST00000536823 TLN1Q9Y490 2541 aaKnown RBP6.97□□□□□ -1.29
YBX3-206ENST00000536823 PIEZO2Q9H5I5 2752 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 A0A1W2PNU3 283 aaPredicted RBP6.96□□□□□ -1.3
YBX3-206ENST00000536823 CCDC66A2RUB6 948 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 GRID2IPA4D2P6 1211 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 APOC4-APOC2K7ER74 178 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 CASC3O15234 703 aaKnown RBP6.96□□□□□ -1.3
YBX3-206ENST00000536823 INPP4BO15327 924 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 NUDT21O43809 227 aaKnown RBP6.96□□□□□ -1.3
YBX3-206ENST00000536823 USP12O75317 370 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 PMPCBO75439 489 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 SLITRK5O94991 958 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 MT-CYBP00156 380 aaPredicted RBP6.96□□□□□ -1.3
YBX3-206ENST00000536823 APOC2P02655 101 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 SLC4A1P02730 911 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 MPOP05164 745 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 PIRTP0C851 137 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 CTNNA2P26232 953 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 AK4P27144 223 aaPredicted RBP6.96□□□□□ -1.3
YBX3-206ENST00000536823 ACTN2P35609 894 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 ADCY8P40145 1251 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 ACTR1BP42025 376 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 LSSP48449 732 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 POLD2P49005 469 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 MAZP56270 477 aaKnown RBP6.96□□□□□ -1.3
YBX3-206ENST00000536823 WNT3AP56704 352 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 ACTR1AP61163 376 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 CCL7P80098 99 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 XRCC4Q13426 336 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 NOMO1Q15155 1222 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 PYCR3Q53H96 274 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 ZNF569Q5MCW4 686 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 SLC30A9Q6PML9 568 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 KDELC1Q6UW63 502 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 SPRED1Q7Z699 444 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 KIAA1328Q86T90 577 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 ZC3H18Q86VM9 953 aaKnown RBP6.96□□□□□ -1.3
YBX3-206ENST00000536823 C17orf82Q86X59 251 aaPredicted RBP6.96□□□□□ -1.3
YBX3-206ENST00000536823 GALNT13Q8IUC8 556 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 SFTPA2Q8IWL1 248 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 ZNF567Q8N184 647 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 FAM13CQ8NE31 585 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 ALG3Q92685 438 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 FGF11Q92914 225 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 ATXN7L3BQ96GX2 97 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 GFM1Q96RP9 751 aaKnown RBP6.96□□□□□ -1.3
YBX3-206ENST00000536823 VAT1Q99536 393 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 BAG1Q99933 345 aaPredicted RBP6.96□□□□□ -1.3
YBX3-206ENST00000536823 HERPUD2Q9BSE4 406 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 HEMGNQ9BXL5 484 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 DPEP2Q9H4A9 486 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 FAM83DQ9H4H8 585 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 MAGEE1Q9HCI5 957 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 ASCL3Q9NQ33 180 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 VPS18Q9P253 973 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 KLHL8Q9P2G9 620 aaPredicted RBP6.96□□□□□ -1.3
YBX3-206ENST00000536823 IMPACTQ9P2X3 320 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 FAM153AQ9UHL3 310 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 APPL1Q9UKG1 709 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 TMEM98Q9Y2Y6 226 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 ZNF711Q9Y462 761 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 PCDHA3Q9Y5H8 950 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 ENTPD2Q9Y5L3 495 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 RNF215Q9Y6U7 377 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 DUSP10Q9Y6W6 482 aa6.96□□□□□ -1.3
YBX3-206ENST00000536823 CCDC187A0A096LP49 1063 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 TEX51A0A1B0GUA7 166 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 A0A1W2PQM1 296 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 MACROD2A1Z1Q3 448 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 FADS2P1A8MWK0 482 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 TMX2-CTNND1H3BSU7 103 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 H7C0C1 242 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 ASMTLO95671 621 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 FGF1P05230 155 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 RPLP0P05388 317 aaKnown RBP6.95□□□□□ -1.3
YBX3-206ENST00000536823 PNLIPP16233 465 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 EIF2S3P41091 472 aaKnown RBP6.95□□□□□ -1.3
YBX3-206ENST00000536823 ABCG1P45844 678 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 ATP5OP48047 213 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 NAP1L1P55209 391 aaKnown RBP6.95□□□□□ -1.3
YBX3-206ENST00000536823 RWDD2BP57060 319 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 ERVPABLB-1P60509 514 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 PEX6Q13608 980 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms