RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 STARD7Q9NQZ5 370 aa15.78■□□□□ 0.12
CHMP1A-202ENST00000535997 MTRRQ9UBK8 725 aa15.78■□□□□ 0.12
CHMP1A-202ENST00000535997 CCL27Q9Y4X3 112 aa15.78■□□□□ 0.12
CHMP1A-202ENST00000535997 HTTP42858 3142 aa15.78■□□□□ 0.12
CHMP1A-202ENST00000535997 H0Y626 953 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 GPR39O43194 453 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 KATNA1O75449 491 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 KCNH1O95259 989 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 HMOX2P30519 316 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 CAP1Q01518 475 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 TRAF3Q13114 568 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 GPNMBQ14956 572 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 KIAA0040Q15053 153 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 C18orf21Q32NC0 220 aaPredicted RBP15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 CCNYL2Q5T2Q4 361 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 TBPL2Q6SJ96 375 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 LYSMD3Q7Z3D4 306 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 GALNT13Q8IUC8 556 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 CRIPAKQ8N1N5 446 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 LRRC43Q8N309 656 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 ITFG1Q8TB96 612 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 FAM126AQ9BYI3 521 aaPredicted RBP15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 NSUN3Q9H649 340 aaKnown RBP15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 PCDHGA11Q9Y5H2 935 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 BACE2Q9Y5Z0 518 aa15.77■□□□□ 0.12
CHMP1A-202ENST00000535997 ALBP02768 609 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 MT-ND1P03886 318 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 ANXA6P08133 673 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 CNPP09543 421 aaKnown RBP15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 GGT1P19440 569 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 DGKAP23743 735 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 MZF1P28698 734 aaPredicted RBP15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 ALDH3A2P51648 485 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 DGKQP52824 942 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 ARSFP54793 590 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 EMP3P54852 163 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 MTPNP58546 118 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 CHRNB3Q05901 458 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 MAD2L1Q13257 205 aaPredicted RBP15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 ARMC12Q5T9G4 340 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 RNF165Q6ZSG1 346 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 FAM43BQ6ZT52 329 aaPredicted RBP15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 SERPINA9Q86WD7 417 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 OFCC1Q8IZS5 231 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 RBFAQ8N0V3 343 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 TERB1Q8NA31 727 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 PIH1D2Q8WWB5 315 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 C12orf43Q96C57 262 aaKnown RBP15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 ZNF583Q96ND8 569 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 CCDC115Q96NT0 180 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 HBEGFQ99075 208 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 ZMYM5Q9UJ78 669 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 GNPTGQ9UJJ9 305 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 EIF3LQ9Y262 564 aaKnown RBP15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 OARD1Q9Y530 152 aa15.77■□□□□ 0.11
CHMP1A-202ENST00000535997 THSD7BQ9C0I4 1608 aa15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 A0A1W2PQ45 241 aaPredicted RBP15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 A0A1W2PQY0 241 aa15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 TAPBPO15533 448 aa15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 RGS14O43566 566 aa15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 PGLSO95336 258 aa15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 ALDH1A1P00352 501 aa15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 SLC2A4P14672 509 aa15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 AP1S1P61966 158 aa15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 PYCR3Q53H96 274 aa15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 METTL2BQ6P1Q9 378 aaKnown RBP15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 GLB1L3Q8NCI6 653 aaPredicted RBP15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 BCL7CQ8WUZ0 217 aaPredicted RBP15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 ZBTB18Q99592 522 aa15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 UGT2B28Q9BY64 529 aa15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 EBF1Q9UH73 591 aa15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 AFF4Q9UHB7 1163 aaKnown RBP15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 CDH7Q9ULB5 785 aa15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 POLR3HQ9Y535 204 aaPredicted RBP15.76■□□□□ 0.11
CHMP1A-202ENST00000535997 UPK1AO00322 258 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 RSL1D1O76021 490 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 PRAMEF1O95521 474 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 IRF1P10914 325 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 CTPS1P17812 591 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 RPL17P18621 184 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 AKT1P31749 480 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 HSPA7P48741 367 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 HLCSP50747 726 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 PMS2P3Q13401 168 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 SELPLGQ14242 412 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 OTUD3Q5T2D3 398 aaPredicted RBP15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 FKBP9P1Q75LS8 142 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 SNX20Q7Z614 316 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 SLC13A3Q8WWT9 602 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 LZICQ8WZA0 190 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 WBP2Q969T9 261 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 DOK1Q99704 481 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 TUBA1CQ9BQE3 449 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 ASB8Q9H765 288 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 ZFYVE1Q9HBF4 777 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 SMPD4Q9NXE4 827 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 OR51B4Q9Y5P0 310 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 V9GYQ6 96 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 TBKBP1A7MCY6 615 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 ARVCFO00192 962 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms