RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 WFIKKN2Q8TEU8 576 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 CPT1BQ92523 772 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 AGAP2Q99490 1192 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 MRPS30Q9NP92 439 aaKnown RBP17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 ARL8BQ9NVJ2 186 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 DHFRP00374 187 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 ESR1P03372 595 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 SDC2P34741 201 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 PTGER3P43115 390 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 TAF1AQ15573 450 aaPredicted RBP17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 TMEM63BQ5T3F8 832 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 SAMD14Q8IZD0 417 aaPredicted RBP17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 COX18Q8N8Q8 333 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 MCFD2Q8NI22 146 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 KLK6Q92876 244 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 ERVK-5Q9HDB9 667 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 IQGAP1P46940 1657 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 RGS10O43665 173 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 PPP1R11O60927 126 aaPredicted RBP17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 AP2A2O94973 939 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 CCNFP41002 786 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 GRK6P43250 576 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 RAB11FIP5Q9BXF6 653 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 SEZ6LQ9BYH1 1024 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 SDCBP2Q9H190 292 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 IL1RAPQ9NPH3 570 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 SNX10Q9Y5X0 201 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 ACRP10323 421 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 NSG1P42857 185 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 LIPEQ05469 1076 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 CRELD2Q6UXH1 353 aaPredicted RBP17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 RASGEF1CQ8N431 466 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 C11orf24Q96F05 449 aaPredicted RBP17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 SMURF2Q9HAU4 748 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 AK5Q9Y6K8 562 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 SCGNO76038 276 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 S100A9P06702 114 aaKnown RBP17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 ZNF823P16415 610 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 ALDH3A2P51648 485 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 RPS6KA3P51812 740 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 SLC8B1Q6J4K2 584 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 CCDC54Q8NEL0 328 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 HM13Q8TCT9 377 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 MFSD3Q96ES6 412 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 SLC35G5Q96KT7 338 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 CPSF4LA6NMK7 179 aaKnown RBP17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 PRPS2P11908 318 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 CLCN7P51798 805 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 VBP1P61758 197 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 POU5F1Q01860 360 aaKnown RBP17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 LCN1P1Q5VSP4 162 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 GALNTL5Q7Z4T8 443 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 SLCO6A1Q86UG4 719 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 ARL10Q8N8L6 244 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 TSTD1Q8NFU3 115 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 SMPDL3BQ92485 455 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 TPK1Q9H3S4 243 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 A0A1W2PRG6 482 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 MYBPHLA2RUH7 354 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 OR4F21O95013 312 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 DAOAP59103 153 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 REP15Q6BDI9 236 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 DMTF1Q9Y222 760 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 NMBRP28336 390 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 KHKP50053 298 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 SWI5Q1ZZU3 235 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 PACS2Q86VP3 889 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 TMEM192Q8IY95 271 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 RASGEF1AQ8N9B8 481 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 OR2AG1Q9H205 316 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 ZNF208O43345 1280 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 CCNB2O95067 398 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 PRKCZQ05513 592 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 AMZ1Q400G9 498 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 ULK3Q6PHR2 472 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 THAP5Q7Z6K1 395 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 RFKQ969G6 155 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 WDR12Q9GZL7 423 aaKnown RBP17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 FZD10Q9ULW2 581 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 SNX7Q9UNH6 387 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 WBP11Q9Y2W2 641 aaKnown RBP17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 MED31Q9Y3C7 131 aa17.93■□□□□ 0.46
SFSWAP-203ENST00000535236 MAGEB17A8MXT2 336 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 TMEM150CB9EJG8 249 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 TRIM3O75382 744 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 PAX7P23759 505 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 PLA2G16P53816 162 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 HNRNPDQ14103 355 aaKnown RBP17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 ZBTB46Q86UZ6 589 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 CPNE9Q8IYJ1 553 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 OR2AJ1Q8NGZ0 328 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 ABCB9Q9NP78 766 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 FBXW11Q9UKB1 542 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 PCDHGA11Q9Y5H2 935 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 ADAMDEC1O15204 470 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 PDPK1O15530 556 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 MPZL2O60487 215 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 SCELO95171 688 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 MT-CYBP00156 380 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 CFIP05156 583 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms