RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	NDST3	O95803	873 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	EPO	P01588	193 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	H2AFZ	P0C0S5	128 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	NR1D1	P20393	614 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	MLLT10	P55197	1068 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	ACY1	Q03154	408 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	TMEM115	Q12893	351 aa	Predicted RBP	11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	LAMB3	Q13751	1172 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	TUBB2A	Q13885	445 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	PDK1	Q15118	436 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	UGT8	Q16880	541 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	KHDC1	Q4VXA5	237 aa	Known RBP	11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	DMRTA1	Q5VZB9	504 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	ZDHHC20	Q5W0Z9	365 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	PAPD7	Q5XG87	772 aa	Known RBP	11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	ALS2CL	Q60I27	953 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	CCDC70	Q6NSX1	233 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	PWWP2B	Q6NUJ5	590 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	ZNF517	Q6ZMY9	492 aa	Predicted RBP	11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	H2AFV	Q71UI9	128 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	TMEM135	Q86UB9	458 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	CPNE8	Q86YQ8	564 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	RNF10	Q8N5U6	811 aa	Known RBP	11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	MYRIP	Q8NFW9	859 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	TRIM58	Q8NG06	486 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	OR8K5	Q8NH50	307 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	CT55	Q8WUE5	264 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	RAPGEF5	Q92565	580 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	OLFM3	Q96PB7	478 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	CD180	Q99467	661 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	TUBB2B	Q9BVA1	445 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	TRABD	Q9H4I3	376 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	C12orf49	Q9H741	205 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	LRRC4C	Q9HCJ2	640 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	CTTNBP2NL	Q9P2B4	639 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	LNPEP	Q9UIQ6	1025 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	RARRES3	Q9UL19	164 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	DNAJC16	Q9Y2G8	782 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	WDR37	Q9Y2I8	494 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	RELN	P78509	3460 aa		11.3	□□□□□ -0.6
CTNND1-238	ENST00000534647	SPTAN1	Q13813	2472 aa	Known RBP	11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	UQCRHL	A0A096LP55	91 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	IGHV5-51	A0A0C4DH38	117 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	LOC285095	A0A1B0GVY8	99 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	MTX2	O75431	263 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	TIAF1	O95411	115 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	UQCRH	P07919	91 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	PIRT	P0C851	137 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	FOLR1	P15328	257 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	ZFX	P17010	805 aa	Predicted RBP	11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	PTPN4	P29074	926 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	HAL	P42357	657 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	ST13	P50502	369 aa	Known RBP	11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	DRG2	P55039	364 aa	Known RBP	11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	TUBB3	Q13509	450 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	SEPT7	Q16181	437 aa	Known RBP	11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	ATP13A5	Q4VNC0	1218 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	C4orf17	Q53FE4	359 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	TEX44	Q53QW1	395 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	IRGC	Q6NXR0	463 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	FAM92B	Q6ZTR7	304 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	SYVN1	Q86TM6	617 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	AMZ2	Q86W34	360 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	CARF	Q8N187	725 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	D2HGDH	Q8N465	521 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	SIDT2	Q8NBJ9	832 aa	Known RBP	11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	ELMO2	Q96JJ3	720 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	SPSB2	Q99619	263 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	LACRT	Q9GZZ8	138 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	ACTL8	Q9H568	366 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	GLOD4	Q9HC38	313 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	IL26	Q9NPH9	171 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	TRIM10	Q9UDY6	481 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	INTU	Q9ULD6	942 aa		11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	G3BP2	Q9UN86	482 aa	Known RBP	11.29	□□□□□ -0.6
CTNND1-238	ENST00000534647	BLACE	A4D250	179 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	KLHL33	A6NCF5	533 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	AURKA	O14965	403 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	VPS4B	O75351	444 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	SLU7	O95391	586 aa	Known RBP	11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	LPO	P22079	712 aa	Predicted RBP	11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	GJC1	P36383	396 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	RPS15	P62841	145 aa	Known RBP	11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	HSD11B2	P80365	405 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	AP1B1	Q10567	949 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	GTF2H3	Q13889	308 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	RPE65	Q16518	533 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	PLA2G4E	Q3MJ16	856 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	LDLRAP1	Q5SW96	308 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	MEI1	Q5TIA1	1274 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	LRRC38	Q5VT99	294 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	METRNL	Q641Q3	311 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	TRAPPC5	Q8IUR0	188 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	MNS1	Q8NEH6	495 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	ZNF514	Q96K75	400 aa	Predicted RBP	11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	TEKT5	Q96M29	485 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	TTC25	Q96NG3	672 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	LRFN5	Q96NI6	719 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms