RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 HDAC10Q969S8 669 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 SLC35C1Q96A29 364 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 NSMCE3Q96MG7 304 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 USP28Q96RU2 1077 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 MRM3Q9HC36 420 aaKnown RBP8.64□□□□□ -1.03
PACS1-213ENST00000533756 SLC23A2Q9UGH3 650 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 PCDHGC3Q9UN70 934 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 SMC3Q9UQE7 1217 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 HS3ST3B1Q9Y662 390 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 ANK3Q12955 4377 aaKnown RBP8.64□□□□□ -1.03
PACS1-213ENST00000533756 CHD3Q12873 2000 aaKnown RBP8.63□□□□□ -1.03
PACS1-213ENST00000533756 GPR37O15354 613 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 SLC16A3O15427 465 aaKnown RBP8.63□□□□□ -1.03
PACS1-213ENST00000533756 PHF1O43189 567 aaPredicted RBP8.63□□□□□ -1.03
PACS1-213ENST00000533756 ASNA1O43681 348 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 ZNF7P17097 686 aaPredicted RBP8.63□□□□□ -1.03
PACS1-213ENST00000533756 ZNF8P17098 575 aaPredicted RBP8.63□□□□□ -1.03
PACS1-213ENST00000533756 RPL10P27635 214 aaKnown RBP8.63□□□□□ -1.03
PACS1-213ENST00000533756 FLT3P36888 993 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 HALP42357 657 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 FMO5P49326 533 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 RENBPP51606 427 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 KPNA2P52292 529 aaKnown RBP8.63□□□□□ -1.03
PACS1-213ENST00000533756 FOXL2P58012 376 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 DCAF7P61962 342 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 PMP22Q01453 160 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 ALDH6A1Q02252 535 aaKnown RBP8.63□□□□□ -1.03
PACS1-213ENST00000533756 CETN1Q12798 172 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 CBLBQ13191 982 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 RFTN1Q14699 578 aaPredicted RBP8.63□□□□□ -1.03
PACS1-213ENST00000533756 INSCQ1MX18 579 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 PTPN20Q4JDL3 420 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 ARMC6Q6NXE6 501 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 FAM173BQ6P4H8 233 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 C3P1Q6ZMU1 363 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 KBTBD2Q8IY47 623 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 GRAMD1CQ8IYS0 662 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 CEP57L1Q8IYX8 460 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 GPR135Q8IZ08 494 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 GHDCQ8N2G8 530 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 CCDC110Q8TBZ0 833 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 PSMF1Q92530 271 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 RND1Q92730 232 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 KREMEN1Q96MU8 473 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 TIMM29Q9BSF4 260 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 CINPQ9BW66 212 aaPredicted RBP8.63□□□□□ -1.03
PACS1-213ENST00000533756 GTPBP4Q9BZE4 634 aaKnown RBP8.63□□□□□ -1.03
PACS1-213ENST00000533756 FAM207AQ9NSI2 230 aaPredicted RBP8.63□□□□□ -1.03
PACS1-213ENST00000533756 FANCLQ9NW38 375 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 ATXN10Q9UBB4 475 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 CDYLQ9Y232 598 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 MEGF8Q7Z7M0 2845 aa8.63□□□□□ -1.03
PACS1-213ENST00000533756 INTS1Q8N201 2190 aaKnown RBP8.62□□□□□ -1.03
PACS1-213ENST00000533756 GTF3C1Q12789 2109 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 A6NNC1 897 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 NPIPA5E9PKD4 350 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 FAM227AF5H4B4 570 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 CHUKO15111 745 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 KMOO15229 486 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 DDX3YO15523 660 aaKnown RBP8.62□□□□□ -1.03
PACS1-213ENST00000533756 WDPCPO95876 746 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 HPP00738 406 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 MYL1P05976 194 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 BMP7P18075 431 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 CDH3P22223 829 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 EPHB2P29323 1055 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 PEX19P40855 299 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 OLIG2Q13516 323 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 STK38Q15208 465 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 PCBP2Q15366 365 aaKnown RBP eCLIP8.62□□□□□ -1.038e-6■■■■□ 24
PACS1-213ENST00000533756 NKAIN1Q4KMZ8 207 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 TDRD12Q587J7 1177 aaKnown RBP8.62□□□□□ -1.03
PACS1-213ENST00000533756 Q5PR19 223 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 ZFYVE27Q5T4F4 411 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 C1orf189Q5VU69 101 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 LRRC66Q68CR7 880 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 FBXO38Q6PIJ6 1188 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 ARSKQ6UWY0 536 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 PRSS57Q6UWY2 283 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 ARCQ7LC44 396 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 C11orf96Q7Z7L8 435 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 PAQR7Q86WK9 346 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 P3H2Q8IVL5 708 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 TMEM151BQ8IW70 566 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 ARHGEF19Q8IW93 802 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 CHERPQ8IWX8 916 aaKnown RBP8.62□□□□□ -1.03
PACS1-213ENST00000533756 NDUFAF2Q8N183 169 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 LRRC75A-AS1Q8N1F1 130 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 MARVELD2Q8N4S9 558 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 LINC00301Q8NCQ3 95 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 OR11G2Q8NGC1 345 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 CFAP57Q96MR6 1250 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 PSKH2Q96QS6 385 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 SARGQ9BW04 601 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 PRR14Q9BWN1 585 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 MAGEB5Q9BZ81 275 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 WDR54Q9H977 334 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 TRIM39Q9HCM9 518 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 ACP6Q9NPH0 428 aa8.62□□□□□ -1.03
PACS1-213ENST00000533756 PTGFRNQ9P2B2 879 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms