RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 DUSP4Q13115 394 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 SIM2Q14190 667 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 HEPACAMQ14CZ8 416 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 KHDC1Q4VXA5 237 aaKnown RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 IFI44LQ53G44 452 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 PRAMEF19Q5SWL8 479 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ATXN7L2Q5T6C5 722 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 LAPTM4BQ86VI4 370 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 JAZF1Q86VZ6 243 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 SDR16C5Q8N3Y7 309 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 CPA6Q8N4T0 437 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 PIGXQ8TBF5 258 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 PRICKLE1Q96MT3 831 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 TRPV5Q9NQA5 729 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ZDHHC18Q9NUE0 388 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 TAS2R7Q9NYW3 318 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 CNTN3Q9P232 1028 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 MSRAQ9UJ68 235 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 PLCL2Q9UPR0 1127 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 CBY1Q9Y3M2 126 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 N6AMT1Q9Y5N5 214 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 U3KQV3 271 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 MYOM1P52179 1685 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 DPPA5A6NC42 116 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 PRORSD1PA6NEY8 169 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 MAGEB17A8MXT2 336 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 M0QX08 132 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 CXCR6O00574 342 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 AIREO43918 545 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 H6PDO95479 791 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 GOT2P00505 430 aaKnown RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 SELPP16109 830 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 NSG1P42857 185 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ARHGDIBP52566 201 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 PRR5P85299 388 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 FOXM1Q08050 763 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 MYBPC3Q14896 1274 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 RNF220Q5VTB9 566 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 RGMBQ6NW40 437 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 TAC4Q86UU9 113 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 RALGPS2Q86X27 583 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 REM2Q8IYK8 340 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 SLC43A3Q8NBI5 491 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 PCDH19Q8TAB3 1148 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 C9orf43Q8TAL5 461 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 SLC13A3Q8WWT9 602 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 UPF1Q92900 1129 aaKnown RBP eCLIP6.92□□□□□ -1.36e-7■■□□□ 14.4
CTNND1-236ENST00000533667 C8orf48Q96LL4 319 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ZNF354BQ96LW1 612 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ZDHHC4Q9NPG8 344 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 MCUBQ9NWR8 336 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 TIMM22Q9Y584 194 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ANKRD26Q9UPS8 1709 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ABHD14A-ACY1A0A1B0GW23 586 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 GPR25O00155 361 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 TSPAN4O14817 238 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 NOS1APO75052 506 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 CLUP10909 449 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 PEX2P28328 305 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 NMBRP28336 390 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 CMPK1P30085 196 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 HSD17B2P37059 387 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 CCNFP41002 786 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 NAE1Q13564 534 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 IL18Q14116 193 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 SMU1Q2TAY7 513 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ZNF311Q5JNZ3 666 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 RBM48Q5RL73 367 aaKnown RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ZDHHC24Q6UX98 284 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 RANBP3LQ86VV4 465 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 AHI1Q8N157 1196 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 TTC29Q8NA56 475 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 LRTOMTQ8WZ04 291 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 DIRAS2Q96HU8 199 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 KLHL32Q96NJ5 620 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 GPATCH1Q9BRR8 931 aaKnown RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 LRRC3Q9BY71 257 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 FZD8Q9H461 694 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 RASSF1Q9NS23 344 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 DEC1Q9P2X7 70 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ERVW-1Q9UQF0 538 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 A0A1W2PQ72 361 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 WTIPA6NIX2 430 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 PIP5K1BO14986 540 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 C9P02748 559 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 PGRP06401 933 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 CD48P09326 243 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 PRKAR2AP13861 404 aaKnown RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ANXA8P13928 327 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 NELFEP18615 380 aaKnown RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 CD247P20963 164 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 PIK3CBP42338 1070 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 HSPA7P48741 367 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 GALK1P51570 392 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 RGS8P57771 180 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 LILRA4P59901 499 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 RPS14P62263 151 aaKnown RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ERVK-8P63133 956 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 NFE2L1Q14494 772 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms