RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 MT-CO3P00414 261 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 RPLP0P05388 317 aaKnown RBP11.73□□□□□ -0.53
SSBP3-214ENST00000533209 SLC35G4P0C7Q5 338 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 ITGB6P18564 788 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 PDHA2P29803 388 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 ALDH4A1P30038 563 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 FMO4P31512 558 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 CCR7P32248 378 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 HALP42357 657 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 SLC1A2P43004 574 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 PREPP48147 710 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 ADARP55265 1226 aaKnown RBP11.73□□□□□ -0.53
SSBP3-214ENST00000533209 RP1P56715 2156 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 SHC2P98077 582 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 RPA4Q13156 261 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 BIRC2Q13490 618 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 FRG1Q14331 258 aaKnown RBP11.73□□□□□ -0.53
SSBP3-214ENST00000533209 PTRHD1Q6GMV3 140 aaKnown RBP11.73□□□□□ -0.53
SSBP3-214ENST00000533209 TRMT10BQ6PF06 316 aaKnown RBP11.73□□□□□ -0.53
SSBP3-214ENST00000533209 NAPRTQ6XQN6 538 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 ZNF761Q86XN6 746 aaPredicted RBP11.73□□□□□ -0.53
SSBP3-214ENST00000533209 MARCH9Q86YJ5 346 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 CNTN4Q8IWV2 1026 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 KRT222Q8N1A0 295 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 CACTIN-AS1Q8N1I8 211 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 GALNT15Q8N3T1 639 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 AVL9Q8NBF6 648 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 LRRN4CLQ8ND94 238 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 WDR48Q8TAF3 677 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 ELMO1Q92556 727 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 SH3KBP1Q96B97 665 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 CXorf40BQ96DE9 158 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 CERS2Q96G23 380 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 SCNM1Q9BWG6 230 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 PHACTR1Q9C0D0 580 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 LRRN3Q9H3W5 708 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 EPB41L5Q9HCM4 733 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 SAYSD1Q9NPB0 183 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 FBXO6Q9NRD1 293 aaPredicted RBP11.73□□□□□ -0.53
SSBP3-214ENST00000533209 IARS2Q9NSE4 1012 aaKnown RBP11.73□□□□□ -0.53
SSBP3-214ENST00000533209 POT1Q9NUX5 634 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 INTS10Q9NVR2 710 aaKnown RBP11.73□□□□□ -0.53
SSBP3-214ENST00000533209 GNPTGQ9UJJ9 305 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 VPS9D1Q9Y2B5 631 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 CRYL1Q9Y2S2 319 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 CFAP20Q9Y6A4 193 aaKnown RBP11.73□□□□□ -0.53
SSBP3-214ENST00000533209 ZFC3H1O60293 1989 aaKnown RBP11.72□□□□□ -0.53
SSBP3-214ENST00000533209 IGHV1OR21-1A0A087WYE8 117 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 FAM149AA5PLN7 773 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 D6RAR5 112 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 VIPP01282 170 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 ESR1P03372 595 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 MTHFD1P11586 935 aaKnown RBP11.72□□□□□ -0.53
SSBP3-214ENST00000533209 AOAHP28039 575 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 CD1CP29017 333 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 MPP1Q00013 466 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 BOP1Q14137 746 aaKnown RBP11.72□□□□□ -0.53
SSBP3-214ENST00000533209 BRD3Q15059 726 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 TEDDM1Q5T9Z0 273 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 DUS1LQ6P1R4 473 aaKnown RBP11.72□□□□□ -0.53
SSBP3-214ENST00000533209 TMEM26Q6ZUK4 368 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 TRIM48Q8IWZ4 208 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 DCBLD1Q8N8Z6 715 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 C2CD4AQ8NCU7 369 aaPredicted RBP11.72□□□□□ -0.53
SSBP3-214ENST00000533209 PYROXD1Q8WU10 500 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 C12orf66Q96MD2 445 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 GFM1Q96RP9 751 aaKnown RBP11.72□□□□□ -0.53
SSBP3-214ENST00000533209 TSSK1BQ9BXA7 367 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 FOXP3Q9BZS1 431 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 STN1Q9H668 368 aaKnown RBP11.72□□□□□ -0.53
SSBP3-214ENST00000533209 UCK1Q9HA47 277 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 SLC40A1Q9NP59 571 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 FAM114A2Q9NRY5 505 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 KCNK4Q9NYG8 393 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 MOCS1Q9NZB8 636 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 SLC17A6Q9P2U8 582 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 CDYLQ9Y232 598 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 PCDHB1Q9Y5F3 818 aa11.72□□□□□ -0.53
SSBP3-214ENST00000533209 LILRA5A6NI73 299 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 H3BMM5 538 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 NIPSNAP2O75323 286 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 GPC4O75487 556 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 TCEA3O75764 348 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 HAUS5O94927 633 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 PKMP14618 531 aaKnown RBP11.71□□□□□ -0.53
SSBP3-214ENST00000533209 JUPP14923 745 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 ACADLP28330 430 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 GABRB3P28472 473 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 LEPRP48357 1165 aaKnown RBP11.71□□□□□ -0.53
SSBP3-214ENST00000533209 CD151P48509 253 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 CARSP49589 748 aaKnown RBP11.71□□□□□ -0.53
SSBP3-214ENST00000533209 PDX1P52945 283 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 EPHA4P54764 986 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 PLOD1Q02809 727 aaPredicted RBP11.71□□□□□ -0.53
SSBP3-214ENST00000533209 CFHR1Q03591 330 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 TARDBPQ13148 414 aaKnown RBP eCLIP11.71□□□□□ -0.53
SSBP3-214ENST00000533209 SQSTM1Q13501 440 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 SPIDRQ14159 915 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 GPR18Q14330 331 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 AMZ1Q400G9 498 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms