RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 SNX1Q13596 522 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 PARP6Q2NL67 630 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 ZNF658BQ4V348 819 aaPredicted RBP18.52■□□□□ 0.56
SSH3-209ENST00000532600 SYT10Q6XYQ8 523 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 ZNF605Q86T29 641 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 NLGN4XQ8N0W4 816 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 NXPE1Q8N323 547 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 NLGN4YQ8NFZ3 816 aaPredicted RBP18.52■□□□□ 0.56
SSH3-209ENST00000532600 OR2L2Q8NH16 312 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 ACTRT1Q8TDG2 376 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 KLHL6Q8WZ60 621 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 ZNF514Q96K75 400 aaPredicted RBP18.52■□□□□ 0.56
SSH3-209ENST00000532600 DNAJC1Q96KC8 554 aaKnown RBP18.52■□□□□ 0.56
SSH3-209ENST00000532600 LINC00615Q96LM1 132 aaPredicted RBP18.52■□□□□ 0.56
SSH3-209ENST00000532600 RMDN2Q96LZ7 410 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 ZPBPQ9BS86 351 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 TMEM121Q9BTD3 319 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 RAB33BQ9H082 229 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 PIH1D1Q9NWS0 290 aaKnown RBP18.52■□□□□ 0.56
SSH3-209ENST00000532600 SEMA5BQ9P283 1151 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 IL17BQ9UHF5 180 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 BSNQ9UPA5 3926 aa18.52■□□□□ 0.55
SSH3-209ENST00000532600 IGHV5-51A0A0C4DH38 117 aa18.51■□□□□ 0.55
SSH3-209ENST00000532600 B8ZZF3 427 aa18.51■□□□□ 0.55
SSH3-209ENST00000532600 CRTAMO95727 393 aa18.51■□□□□ 0.55
SSH3-209ENST00000532600 FOXM1Q08050 763 aa18.51■□□□□ 0.55
SSH3-209ENST00000532600 CCNG2Q16589 344 aa18.51■□□□□ 0.55
SSH3-209ENST00000532600 IRGCQ6NXR0 463 aa18.51■□□□□ 0.55
SSH3-209ENST00000532600 PRUNE1Q86TP1 453 aa18.51■□□□□ 0.55
SSH3-209ENST00000532600 CREG2Q8IUH2 290 aa18.51■□□□□ 0.55
SSH3-209ENST00000532600 TAB3Q8N5C8 712 aaPredicted RBP18.51■□□□□ 0.55
SSH3-209ENST00000532600 ZSCAN1Q8NBB4 408 aa18.51■□□□□ 0.55
SSH3-209ENST00000532600 C19orf43Q9BQ61 176 aa18.51■□□□□ 0.55
SSH3-209ENST00000532600 AP1M1Q9BXS5 423 aa18.51■□□□□ 0.55
SSH3-209ENST00000532600 FRMD8P1Q9BZ68 369 aaPredicted RBP18.51■□□□□ 0.55
SSH3-209ENST00000532600 FAM8A1Q9UBU6 413 aa18.51■□□□□ 0.55
SSH3-209ENST00000532600 IGLV3-16A0A075B6K0 115 aa18.5■□□□□ 0.55
SSH3-209ENST00000532600 TRBV5-4A0A0C4DH59 114 aa18.5■□□□□ 0.55
SSH3-209ENST00000532600 PGRMC1O00264 195 aaKnown RBP18.5■□□□□ 0.55
SSH3-209ENST00000532600 NKX2-8O15522 239 aa18.5■□□□□ 0.55
SSH3-209ENST00000532600 ZIC2O95409 532 aaPredicted RBP18.5■□□□□ 0.55
SSH3-209ENST00000532600 TCP1P17987 556 aaKnown RBP18.5■□□□□ 0.55
SSH3-209ENST00000532600 F8A1P23610 371 aa18.5■□□□□ 0.55
SSH3-209ENST00000532600 MAP4P27816 1152 aaKnown RBP18.5■□□□□ 0.55
SSH3-209ENST00000532600 MC4RP32245 332 aa18.5■□□□□ 0.55
SSH3-209ENST00000532600 CACHD1Q5VU97 1274 aa18.5■□□□□ 0.55
SSH3-209ENST00000532600 TTC27Q6P3X3 843 aa18.5■□□□□ 0.55
SSH3-209ENST00000532600 CERS6Q6ZMG9 384 aa18.5■□□□□ 0.55
SSH3-209ENST00000532600 ARHGEF18Q6ZSZ5 1173 aa18.5■□□□□ 0.55
SSH3-209ENST00000532600 SNX20Q7Z614 316 aa18.5■□□□□ 0.55
SSH3-209ENST00000532600 GLIS1Q8NBF1 620 aa18.5■□□□□ 0.55
SSH3-209ENST00000532600 C16orf45Q96MC5 204 aaPredicted RBP18.5■□□□□ 0.55
SSH3-209ENST00000532600 OR6C1Q96RD1 312 aa18.5■□□□□ 0.55
SSH3-209ENST00000532600 IMP3Q9NV31 184 aaKnown RBP18.5■□□□□ 0.55
SSH3-209ENST00000532600 FEZ2Q9UHY8 353 aaPredicted RBP18.5■□□□□ 0.55
SSH3-209ENST00000532600 CRLS1Q9UJA2 301 aa18.5■□□□□ 0.55
SSH3-209ENST00000532600 RASSF9O75901 435 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 NELFEP18615 380 aaKnown RBP18.49■□□□□ 0.55
SSH3-209ENST00000532600 STAT5AP42229 794 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 KCNJ1P48048 391 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 PRLHRP49683 370 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 PDE1BQ01064 536 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 ABHD18Q0P651 414 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 CAPRIN2Q6IMN6 1127 aaKnown RBP18.49■□□□□ 0.55
SSH3-209ENST00000532600 DRICH1Q6PGQ1 229 aaPredicted RBP18.49■□□□□ 0.55
SSH3-209ENST00000532600 PIANPQ8IYJ0 282 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 ULK4Q96C45 1275 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 ZDHHC12Q96GR4 267 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 ELMO2Q96JJ3 720 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 SLC45A3Q96JT2 553 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 SLC41A2Q96JW4 573 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 CAPZA3Q96KX2 299 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 C12orf66Q96MD2 445 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 PPP1R2P1Q96PQ5 205 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 NRTNQ99748 197 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 LRRC40Q9H9A6 602 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 STARD5Q9NSY2 213 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 NLE1Q9NVX2 485 aaPredicted RBP18.49■□□□□ 0.55
SSH3-209ENST00000532600 SLC24A2Q9UI40 661 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 SAR1BQ9Y6B6 198 aa18.49■□□□□ 0.55
SSH3-209ENST00000532600 OR5K3A6NET4 321 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 H7C0S8 307 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 TERTO14746 1132 aaKnown RBP18.48■□□□□ 0.55
SSH3-209ENST00000532600 TIAF1O95411 115 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 AP2A1O95782 977 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 POLBP06746 335 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 FGF5P12034 268 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 ETS1P14921 441 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 FOLR1P15328 257 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 ITGALP20701 1170 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 PSMA3P25788 255 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 ACRV1P26436 265 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 CASQ1P31415 396 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 MAP7Q14244 749 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 KCNAB1Q14722 419 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 POU6F1Q14863 301 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 CYP1B1Q16678 543 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 SERPINA9Q86WD7 417 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 MAIP1Q8WWC4 291 aa18.48■□□□□ 0.55
SSH3-209ENST00000532600 PPM1MQ96MI6 270 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms