RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 TRIM23P36406 574 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 AVPR1AP37288 418 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 PBX2P40425 430 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 GDI2P50395 445 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 GCNT1Q02742 428 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 PTPN11Q06124 597 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 GALNT1Q10472 559 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 EFEMP1Q12805 493 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 EFR3AQ14156 821 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 PSMD5Q16401 504 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 HIST2H2ACQ16777 129 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 ZACNQ401N2 412 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 CDONQ4KMG0 1287 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 MSS51Q4VC12 460 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 ARL13AQ5H913 290 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 MBLAC2Q68D91 279 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 METTL2BQ6P1Q9 378 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 FUT10Q6P4F1 479 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 FAM131AQ6UXB0 335 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 PIWIL4Q7Z3Z4 852 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 NPAS4Q8IUM7 802 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 NAT8LQ8N9F0 302 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 RHOXF1Q8NHV9 184 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 CDC26Q8NHZ8 85 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 SLC7A14Q8TBB6 771 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 ZNF606Q8WXB4 792 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 EMID1Q96A84 441 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 ELMO2Q96JJ3 720 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 CNDP2Q96KP4 475 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 TMEM209Q96SK2 561 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 CPXM1Q96SM3 734 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 C17orf62Q9BQA9 187 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 GINS4Q9BRT9 223 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 NTPCRQ9BSD7 190 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 GPR62Q9BZJ7 368 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 HDHD2Q9H0R4 259 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 SNX15Q9NRS6 342 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 MPP6Q9NZW5 540 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 EDARQ9UNE0 448 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 SCN4AP35499 1836 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 PHIPQ8WWQ0 1821 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 EP300Q09472 2414 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 GVINP1Q7Z2Y8 2422 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 H0YAE9 185 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 H3BMM5 538 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 SNNO75324 88 aaPredicted RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 GCATO75600 419 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 SNAP29O95721 258 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 TIMP1P01033 207 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 CST1P01037 141 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 FTH1P02794 183 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 S100A6P06703 90 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 BMP2P12643 396 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 PGAM1P18669 254 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 CXCR2P25025 360 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 GCAP28676 217 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 SNRPD2P62316 118 aaKnown RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 YWHAZP63104 245 aaKnown RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 ADIGQ0VDE8 80 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 RFTN1Q14699 578 aaPredicted RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 TCEAL1Q15170 157 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 ATP6AP1LQ52LC2 224 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 IGSF11Q5DX21 431 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 CMC1Q7Z7K0 106 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 FAM131BQ86XD5 332 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 PLCZ1Q86YW0 608 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 DTX3Q8N9I9 347 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 OR6Q1Q8NGQ2 317 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 WDR36Q8NI36 951 aaKnown RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 FBXO32Q969P5 355 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 TMEM176AQ96HP8 235 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 GFM1Q96RP9 751 aaKnown RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 FIZ1Q96SL8 496 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 BCL7BQ9BQE9 202 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 CHCHD6Q9BRQ6 235 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 ZNF518BQ9C0D4 1074 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 NKX2-4Q9H2Z4 354 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 MUC13Q9H3R2 512 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 PRDM12Q9H4Q4 367 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 SOX17Q9H6I2 414 aaPredicted RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 IFT22Q9H7X7 185 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 NANOGQ9H9S0 305 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 ADAM28Q9UKQ2 775 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 PCDHGB4Q9UN71 923 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 MAPRE3Q9UPY8 281 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 HCN4Q9Y3Q4 1203 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 PCDHGB5Q9Y5G0 923 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 MAST2Q6P0Q8 1798 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 EVPLQ92817 2033 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 LCHNA4D1U4 455 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 BBIP1A8MTZ0 92 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 BCKDKO14874 412 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 ORC5O43913 435 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 PLOD3O60568 738 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 CSH1P0DML2 217 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 CSH2P0DML3 217 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 NPR3P17342 541 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 KDELR1P24390 212 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 HARS2P49590 506 aaKnown RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 SPCS2Q15005 226 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms