RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 IRX2Q9BZI1 471 aaPredicted RBP5.15□□□□□ -1.58
ECHDC1-222ENST00000531967 SLCO5A1Q9H2Y9 848 aa5.15□□□□□ -1.58
ECHDC1-222ENST00000531967 MGAT4CQ9UBM8 478 aa5.15□□□□□ -1.58
ECHDC1-222ENST00000531967 NIP7Q9Y221 180 aaKnown RBP eCLIP5.15□□□□□ -1.58
ECHDC1-222ENST00000531967 GRIN2BQ13224 1484 aa5.15□□□□□ -1.58
ECHDC1-222ENST00000531967 KTN1Q86UP2 1357 aaKnown RBP5.15□□□□□ -1.58
ECHDC1-222ENST00000531967 CCDC7Q96M83 1385 aa5.15□□□□□ -1.58
ECHDC1-222ENST00000531967 PFASO15067 1338 aa5.15□□□□□ -1.58
ECHDC1-222ENST00000531967 CGNL1Q0VF96 1302 aa5.15□□□□□ -1.58
ECHDC1-222ENST00000531967 MACROD2A1Z1Q3 448 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 SUPT3HB4E1H0 165 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 MAP2K7O14733 419 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 ST8SIA5O15466 376 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 MAGEB2O15479 319 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 ATG13O75143 517 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 WBP4O75554 376 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 KRT36O76013 467 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 HMBSP08397 361 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 IGFBP1P08833 259 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 APEHP13798 732 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 HOXA6P31267 233 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 PRKAG1P54619 331 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 LILRA4P59901 499 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 CYLC2Q14093 348 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 SMN1Q16637 294 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 UGCGQ16739 394 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 USP41Q3LFD5 358 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 HIKESHIQ53FT3 197 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 CARD17Q5XLA6 110 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 TMEM198Q66K66 360 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 LHX8Q68G74 356 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 TXNDC8Q6A555 127 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 FAM173BQ6P4H8 233 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 DLEU7Q6UYE1 221 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 ZBTB49Q6ZSB9 765 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 TRMT11Q7Z4G4 463 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 DCP2Q8IU60 420 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 IGDCC3Q8IVU1 814 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 GPR161Q8N6U8 529 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 TTLL6Q8N841 843 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 C11orf44Q8N8P7 122 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 STKLD1Q8NE28 680 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 B4GALNT2Q8NHY0 566 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 LKAAEAR1Q8TD35 194 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 CAVIN3Q969G5 261 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 PABPC5Q96DU9 382 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 THOC3Q96J01 351 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 MAGED4Q96JG8 741 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 ZNF583Q96ND8 569 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 NUP58Q9BVL2 599 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 BBS2Q9BXC9 721 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 NUSAP1Q9BXS6 441 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 TDRD1Q9BXT4 1180 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 GPR87Q9BY21 358 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 PLEKHA4Q9H4M7 779 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 ACTR8Q9H981 624 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 GBA2Q9HCG7 927 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 IL26Q9NPH9 171 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 PAK6Q9NQU5 681 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 BABAM1Q9NWV8 329 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 PEF1Q9UBV8 284 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 PLCL2Q9UPR0 1127 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 ENTPD4Q9Y227 616 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 LRRIQ1Q96JM4 1722 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 MIA2Q96PC5 1412 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 LRPPRCP42704 1394 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 ZMYM3Q14202 1370 aa5.15□□□□□ -1.59
ECHDC1-222ENST00000531967 CYP3A7-CYP3A51PA0A087WV96 503 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 BECN2A8MW95 431 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 USP17L23D6RBM5 183 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 PPP6CO00743 305 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 CTDSPLO15194 276 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 KCNAB3O43448 404 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 FRAT2O75474 233 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 CLPXO76031 633 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 HAUS5O94927 633 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 ECDO95905 644 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 TGM6O95932 706 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 NFICP08651 508 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 LINGO3P0C6S8 592 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 ZCCHC18P0CG32 403 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 CYP3A7P24462 503 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 IGHMBP2P38935 993 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 RAP1GAPP47736 663 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 MAPKAPK2P49137 400 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 HNRNPH2P55795 449 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 TAS2R50P59544 299 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 IL13RA2Q14627 380 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 COL28A1Q2UY09 1125 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 SPANXN2Q5MJ10 180 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 AGBL2Q5U5Z8 902 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 TXNRD3NBQ6F5E7 133 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 DHRS7BQ6IAN0 325 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 ACAD11Q709F0 780 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 ZNF595Q8IYB9 648 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 KATNAL2Q8IYT4 538 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 SLC17A8Q8NDX2 589 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 RDM1Q8NG50 284 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 PAQR8Q8TEZ7 354 aa5.14□□□□□ -1.59
ECHDC1-222ENST00000531967 ZSWIM3Q96MP5 696 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms