RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 RNF14Q9UBS8 474 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 EPHA6Q9UF33 1036 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 AMACRQ9UHK6 382 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 ANAPC7Q9UJX3 599 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 SHOC2Q9UQ13 582 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 PCDHGA9Q9Y5G4 932 aaKnown RBP9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 SPO11Q9Y5K1 396 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 BZW2Q9Y6E2 419 aaKnown RBP9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 F8P00451 2351 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 CELSR1Q9NYQ6 3014 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 MACROD2A1Z1Q3 448 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 CCDC66A2RUB6 948 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 ARGFXA6NJG6 315 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 PDZK1P1A8MUH7 402 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 GPR89AB7ZAQ6 455 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 CES2O00748 559 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 MTA2O94776 668 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 JCHAINP01591 159 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 SLC4A1P02730 911 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 RHOXF2BP0C7M4 288 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 CCNYL3P0C7X3 344 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 GPR89BP0CG08 455 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 BPIP17213 487 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 AMD1P17707 334 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 CES1P23141 567 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 PTPN4P29074 926 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 PTGIRP43119 386 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 MAGEA1P43355 309 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 KLHL30Q0D2K2 578 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 KRT81Q14533 505 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 INPP5JQ15735 1006 aaPredicted RBP9□□□□□ -0.97
CHMP4A-205ENST00000531158 SLC18A3Q16572 532 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 EIF2S3LQ2VIR3 472 aaKnown RBP9□□□□□ -0.97
CHMP4A-205ENST00000531158 PRAMEF17Q5VTA0 474 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 TIGD7Q6NT04 549 aaPredicted RBP9□□□□□ -0.97
CHMP4A-205ENST00000531158 JMJD6Q6NYC1 403 aaPredicted RBP9□□□□□ -0.97
CHMP4A-205ENST00000531158 WASH2PQ6VEQ5 465 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 ZNF771Q7L3S4 317 aaPredicted RBP9□□□□□ -0.97
CHMP4A-205ENST00000531158 TMC3Q7Z5M5 1100 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 TRIM48Q8IWZ4 208 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 AVL9Q8NBF6 648 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 TADA1Q96BN2 335 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 HDAC11Q96DB2 347 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 TRIM11Q96F44 468 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 PPM1MQ96MI6 270 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 MAP3K3Q99759 626 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 RHOXF2Q9BQY4 288 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 ZSCAN5AQ9BUG6 496 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 SLC25A23Q9BV35 468 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 NUDT9Q9BW91 350 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 MED4Q9NPJ6 270 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 WASH6PQ9NQA3 447 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 PSD3Q9NYI0 1048 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 ERRFI1Q9UJM3 462 aaPredicted RBP9□□□□□ -0.97
CHMP4A-205ENST00000531158 NENFQ9UMX5 172 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 ZNF711Q9Y462 761 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 CAPN6Q9Y6Q1 641 aa9□□□□□ -0.97
CHMP4A-205ENST00000531158 ADGRG4Q8IZF6 3080 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 A0A087X0T9 212 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 GRID2IPA4D2P6 1211 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 KMOO15229 486 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 DDX3YO15523 660 aaKnown RBP8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 DDAH2O95865 285 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 LDLRP01130 860 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 MT-ND3P03897 115 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 CYP1A2P05177 515 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 CAPN1P07384 714 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 FAM228BP0C875 321 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 GJC1P36383 396 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 NOP2P46087 812 aaKnown RBP8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 CCL11P51671 97 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 PGDP52209 483 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 CTSCP53634 463 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 ITGA1P56199 1179 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 IFI35P80217 286 aaPredicted RBP8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 PPIDQ08752 370 aaKnown RBP8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 ABRQ12979 859 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 CASP8Q14790 479 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 NOMO1Q15155 1222 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 GPR19Q15760 415 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 ATP13A5Q4VNC0 1218 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 ZNF789Q5FWF6 425 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 DUS1LQ6P1R4 473 aaKnown RBP8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 B4GALNT4Q76KP1 1039 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 SYVN1Q86TM6 617 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 D2HGDHQ8N465 521 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 EFCAB3Q8N7B9 438 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 PLD5Q8N7P1 536 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 RBMXL3Q8N7X1 1067 aaKnown RBP8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 FDCSPQ8NFU4 85 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 CCHCR1Q8TD31 782 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 NAT14Q8WUY8 206 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 THAP4Q8WY91 577 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 ZNF501Q96CX3 271 aaPredicted RBP8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 C19orf60Q96EN9 201 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 IMP4Q96G21 291 aaKnown RBP8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 ZDHHC12Q96GR4 267 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 OSBPL9Q96SU4 736 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 ZNF670Q9BS34 389 aa8.99□□□□□ -0.97
CHMP4A-205ENST00000531158 ING2Q9H160 280 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms