RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 EEF1AKMT1Q8WVE0 214 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 TANKQ92844 425 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 ACDQ96AP0 544 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 EID2BQ96D98 161 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 C19orf60Q96EN9 201 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 DUS3LQ96G46 650 aaKnown RBP11.4□□□□□ -0.58
USP35-207ENST00000530546 TLR9Q9NR96 1032 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 ADA2Q9NZK5 511 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 CROCCQ5TZA2 2017 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 CHD5Q8TDI0 1954 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 C9JVG2 144 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 J3QRK9 145 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 TRIM38O00635 465 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 FGF18O76093 207 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 POLR2EP19388 210 aaKnown RBP11.4□□□□□ -0.59
USP35-207ENST00000530546 CD247P20963 164 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 MYF6P23409 242 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 TTPAP49638 278 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 RAB39AQ14964 217 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 INO80DQ53TQ3 878 aaPredicted RBP11.4□□□□□ -0.59
USP35-207ENST00000530546 GPR107Q5VW38 600 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 SCIMPQ6UWF3 145 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 CYHR1Q6ZMK1 362 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 CLYBLQ8N0X4 340 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 DCBLD1Q8N8Z6 715 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 HMGCLL1Q8TB92 370 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 SLC22A17Q8WUG5 538 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 STON2Q8WXE9 905 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 KIAA1191Q96A73 305 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 FBXL8Q96CD0 374 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 ALG14Q96F25 216 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 TRMOQ9BU70 441 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 POPDC3Q9HBV1 291 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 SAGE1Q9NXZ1 904 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 SUCOQ9UBS9 1254 aaKnown RBP11.4□□□□□ -0.59
USP35-207ENST00000530546 DAPK2Q9UIK4 370 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 STOML2Q9UJZ1 356 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 TIMM22Q9Y584 194 aa11.4□□□□□ -0.59
USP35-207ENST00000530546 COL4A6Q14031 1691 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 LCHNA4D1U4 455 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 TMX2-CTNND1H3BSU7 103 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 PIP5K1BO14986 540 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 CCL16O15467 120 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 AKAP10O43572 662 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 KERAO60938 352 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 LINC00032P0C843 101 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 CD70P32970 193 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 ARL1P40616 181 aaPredicted RBP11.39□□□□□ -0.59
USP35-207ENST00000530546 TMBIM6P55061 237 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 CD300CQ08708 224 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 LMAN2Q12907 356 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 NFATC3Q12968 1075 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 KIF19Q2TAC6 998 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 AGAP7PQ5VUJ5 663 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 RETSATQ6NUM9 610 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 PPP4R4Q6NUP7 873 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 Q6ZNB5 142 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 ZNF786Q8N393 782 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 DCAF4L2Q8NA75 395 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 TRIM43Q96BQ3 446 aaPredicted RBP11.39□□□□□ -0.59
USP35-207ENST00000530546 SLC45A3Q96JT2 553 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 TCF12Q99081 682 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 EFHD1Q9BUP0 239 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 C2orf49Q9BVC5 232 aaPredicted RBP11.39□□□□□ -0.59
USP35-207ENST00000530546 DERL2Q9GZP9 239 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 RC3H2Q9HBD1 1191 aaKnown RBP11.39□□□□□ -0.59
USP35-207ENST00000530546 HACD3Q9P035 362 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 IFT52Q9Y366 437 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 CORINQ9Y5Q5 1042 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 DNAJC15Q9Y5T4 150 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 COMMD10Q9Y6G5 202 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 AZIN1O14977 448 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 CLPXO76031 633 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 CXCL14O95715 111 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 C8AP07357 584 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 CCNA2P20248 432 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 PSMD8P48556 350 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 STK19P49842 368 aaPredicted RBP11.39□□□□□ -0.59
USP35-207ENST00000530546 ATP6V0D1P61421 351 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 NFKB2Q00653 900 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 RHDQ02161 417 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 CLCQ05315 142 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 PMS2P3Q13401 168 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 SQLEQ14534 574 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 ZNF783Q6ZMS7 281 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 IGFN1Q86VF2 1251 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 CMTR2Q8IYT2 770 aaKnown RBP11.39□□□□□ -0.59
USP35-207ENST00000530546 MFSD2AQ8NA29 543 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 RHEBL1Q8TAI7 183 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 TWIST2Q8WVJ9 160 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 ATP6V1E2Q96A05 226 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 FUBP1Q96AE4 644 aaKnown RBP11.39□□□□□ -0.59
USP35-207ENST00000530546 EHD1Q9H4M9 534 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 AKTIPQ9H8T0 292 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 DUS2Q9NX74 493 aaKnown RBP11.39□□□□□ -0.59
USP35-207ENST00000530546 IL17CQ9P0M4 197 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 OAS3Q9Y6K5 1087 aaKnown RBP11.39□□□□□ -0.59
USP35-207ENST00000530546 LAMA3Q16787 3333 aa11.39□□□□□ -0.59
USP35-207ENST00000530546 C1orf232A0A0U1RR37 186 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 RSL1D1O76021 490 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms