RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ISCUQ9H1K1 167 aa10.16□□□□□ -0.78
COPB1-207ENST00000529866 ZNF552Q9H707 407 aaPredicted RBP10.16□□□□□ -0.78
COPB1-207ENST00000529866 CBX8Q9HC52 389 aa10.16□□□□□ -0.78
COPB1-207ENST00000529866 PCDH18Q9HCL0 1135 aa10.16□□□□□ -0.78
COPB1-207ENST00000529866 DTLQ9NZJ0 730 aa10.16□□□□□ -0.78
COPB1-207ENST00000529866 COPG2Q9UBF2 871 aa10.16□□□□□ -0.78
COPB1-207ENST00000529866 SHOC2Q9UQ13 582 aa10.16□□□□□ -0.78
COPB1-207ENST00000529866 KLF2Q9Y5W3 355 aaPredicted RBP10.16□□□□□ -0.78
COPB1-207ENST00000529866 PDZD2O15018 2839 aa10.16□□□□□ -0.78
COPB1-207ENST00000529866 SYCE3A1L190 88 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 OR6C74A6NCV1 312 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 SMTNL1A8MU46 457 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 E7EQ34 232 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 MATN2O00339 956 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 LDB2O43679 373 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 CAPN1P07384 714 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 CD63P08962 238 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 MTHFD1P11586 935 aaKnown RBP10.15□□□□□ -0.78
COPB1-207ENST00000529866 GZMAP12544 262 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 HLA-DPA1P20036 260 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 CDH3P22223 829 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 CCNCP24863 283 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 FOLR3P41439 243 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 PREPP48147 710 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 SLC25A11Q02978 314 aaKnown RBP10.15□□□□□ -0.78
COPB1-207ENST00000529866 TMEM115Q12893 351 aaPredicted RBP10.15□□□□□ -0.78
COPB1-207ENST00000529866 SSPNQ14714 243 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 PTCHD3Q3KNS1 767 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 ZFYVE27Q5T4F4 411 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 TMC3Q7Z5M5 1100 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 C11orf96Q7Z7L8 435 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 KCNMB4Q86W47 210 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 PPP4R1Q8TF05 950 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 ZFPM2Q8WW38 1151 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 EID2BQ96D98 161 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 TSGA13Q96PP4 275 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 TRAPPC9Q96Q05 1148 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 SRPK1Q96SB4 655 aaKnown RBP10.15□□□□□ -0.78
COPB1-207ENST00000529866 NAT10Q9H0A0 1025 aaKnown RBP10.15□□□□□ -0.78
COPB1-207ENST00000529866 MAGEE1Q9HCI5 957 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 SERTAD3Q9UJW9 196 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 NOVA2Q9UNW9 492 aaKnown RBP10.15□□□□□ -0.78
COPB1-207ENST00000529866 NTNG1Q9Y2I2 539 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 ZNF711Q9Y462 761 aa10.15□□□□□ -0.78
COPB1-207ENST00000529866 A0A087X0T9 212 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 E2F3O00716 465 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 POP7O75817 140 aaKnown RBP10.14□□□□□ -0.79
COPB1-207ENST00000529866 SERPINC1P01008 464 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 STSP08842 583 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 CD48P09326 243 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 MSL3P1P0C860 447 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 FAM228BP0C875 321 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 BPIP17213 487 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 TSFMP43897 325 aaKnown RBP10.14□□□□□ -0.79
COPB1-207ENST00000529866 KPNA2P52292 529 aaKnown RBP10.14□□□□□ -0.79
COPB1-207ENST00000529866 FANCCQ00597 558 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 MMRN1Q13201 1228 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 ART3Q13508 389 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 PIGHQ14442 188 aaPredicted RBP10.14□□□□□ -0.79
COPB1-207ENST00000529866 CYP2A13Q16696 494 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 FILIP1LQ4L180 1135 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 KHDC1Q4VXA5 237 aaKnown RBP10.14□□□□□ -0.79
COPB1-207ENST00000529866 FIGNQ5HY92 759 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 IRAK1BP1Q5VVH5 260 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 ZDHHC20Q5W0Z9 365 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 NCBP2-AS2Q69YL0 99 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 FJX1Q86VR8 437 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 GPR135Q8IZ08 494 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 BEND7Q8N7W2 519 aaPredicted RBP10.14□□□□□ -0.79
COPB1-207ENST00000529866 OR1L3Q8NH93 324 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 GRHL3Q8TE85 626 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 FAR1Q8WVX9 515 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 LURAP1Q96LR2 239 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 C12orf66Q96MD2 445 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 ZNF830Q96NB3 372 aaPredicted RBP10.14□□□□□ -0.79
COPB1-207ENST00000529866 AGAP3Q96P47 875 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 GBP5Q96PP8 586 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 KIR3DX1Q9H7L2 352 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 CHST11Q9NPF2 352 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 C1GALT1Q9NS00 363 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 GPN3Q9UHW5 284 aaPredicted RBP10.14□□□□□ -0.79
COPB1-207ENST00000529866 POMT2Q9UKY4 750 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 NENFQ9UMX5 172 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 PSMD13Q9UNM6 376 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 PCNX1Q96RV3 2341 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 ABCA2Q9BZC7 2435 aa10.14□□□□□ -0.79
COPB1-207ENST00000529866 SPG11Q96JI7 2443 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 A0A1W2PQJ5 194 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 GSAPA4D1B5 854 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 KLHL33A6NCF5 533 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 SLC9B1P1A6NJY1 282 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 KLF7O75840 302 aaPredicted RBP10.13□□□□□ -0.79
COPB1-207ENST00000529866 LCA5LO95447 670 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 GYPCP04921 128 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 SLC35G4P0C7Q5 338 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 PIRTP0C851 137 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 COX6B1P14854 86 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 NDUFS1P28331 727 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 CA5AP35218 305 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 ARCN1P48444 511 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms