RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SLC35G4P0C7Q5 338 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 MTHFD1P11586 935 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 PAMP19021 973 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 CD151P48509 253 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 GABREP78334 506 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 RPA4Q13156 261 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 EIF3IQ13347 325 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 TRA2AQ13595 282 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 GPR18Q14330 331 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 MRNIPQ6NTE8 343 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 HIBCHQ6NVY1 386 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 ZNF449Q6P9G9 518 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 RAB11FIP2Q7L804 512 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 ZNF572Q7Z3I7 529 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 SDCCAG8Q86SQ7 713 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 LSMEM2Q8N112 164 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 NCSTNQ92542 709 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 ELMO1Q92556 727 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 TMEM159Q96B96 161 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 ZNF669Q96BR6 464 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 STAMBPL1Q96FJ0 436 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 SNF8Q96H20 258 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 PRR11Q96HE9 360 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 RMDN2Q96LZ7 410 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 C12orf66Q96MD2 445 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 TCF12Q99081 682 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 CARD6Q9BX69 1037 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 P2RY12Q9H244 342 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 OR52A5Q9H2C5 316 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 EPB41L5Q9HCM4 733 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 IMP3Q9NV31 184 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 PCDHGA8Q9Y5G5 932 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 CFAP20Q9Y6A4 193 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 MAD1L1Q9Y6D9 718 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 SLC5A10A0PJK1 596 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 EFCAB8A8MWE9 144 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 TP73O15350 636 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 BRINP1O60477 761 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 DXOO77932 396 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 UBXN7O94888 489 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 SEC31AO94979 1220 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 TUBB4AP04350 444 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 OGNP20774 298 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 RPS3P23396 243 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 PDHA2P29803 388 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 MAPK9P45984 424 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 PREPP48147 710 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 PPM1FP49593 454 aaPredicted RBP12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 ITGA8P53708 1063 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 DHX9Q08211 1270 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 C2orf54Q08AI8 447 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 TYSND1Q2T9J0 566 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 MSS51Q4VC12 460 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 DNAJC21Q5F1R6 531 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 C3orf38Q5JPI3 329 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 PHF19Q5T6S3 580 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 NEPROQ6NW34 567 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 IGF2-ASQ6U949 168 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 MAATS1Q7Z4T9 603 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 LRRC6Q86X45 466 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 PROSER1Q86XN7 944 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 FBXO39Q8N4B4 442 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 OTUD6BQ8N6M0 293 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 TRIM44Q96DX7 344 aaPredicted RBP12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 SLC46A1Q96NT5 459 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 EBNA1BP2Q99848 306 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 TRIM31Q9BZY9 425 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 OGFRQ9NZT2 677 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 TMEM9Q9P0T7 183 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 CDC23Q9UJX2 597 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 ZMIZ1Q9ULJ6 1067 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 SNX24Q9Y343 169 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 HEBP2Q9Y5Z4 205 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 FAM169AQ9Y6X4 670 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 COLEC10Q9Y6Z7 277 aa12.38□□□□□ -0.43
CCDC90B-216ENST00000529856 FREM2Q5SZK8 3169 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 PMS2P1A4D2B8 440 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 IQCF5A8MTL0 148 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 IFRD1O00458 451 aaPredicted RBP12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 PLD2O14939 933 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 HGSO14964 777 aaPredicted RBP12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 PFDN6O15212 129 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 RAD51CO43502 376 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 BANF1O75531 89 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 URI1O94763 535 aaPredicted RBP12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 THRAP10827 490 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 TYRP1P17643 537 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 AMD1P17707 334 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 ITGB6P18564 788 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 PGAM1P18669 254 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 MPSTP25325 297 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 CCR7P32248 378 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 RPL21P46778 160 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 MRPS25P82663 173 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 PLOD1Q02809 727 aaPredicted RBP12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 THOC5Q13769 683 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 C16orf72Q14CZ0 275 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 ST3GAL2Q16842 350 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 LONRF1Q17RB8 773 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 BBS9Q3SYG4 887 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms