RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 HERC4Q5GLZ8 1057 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-212ENST00000529046 TCEAL5Q5H9L2 206 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 TMEM184AQ6ZMB5 413 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 SLC24A5Q71RS6 500 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 R3HCC1LQ7Z5L2 792 aaKnown RBP4.81□□□□□ -1.64
CSDE1-212ENST00000529046 PAF1Q8N7H5 531 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 NEXN-AS1Q8NBZ9 246 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 CCDC12Q8WUD4 166 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-212ENST00000529046 DNAJB3Q8WWF6 145 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 ASB5Q8WWX0 329 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 WASF1Q92558 559 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 SAAL1Q96ER3 474 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 KLHL15Q96M94 604 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 CDCA3Q99618 268 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-212ENST00000529046 STRA6Q9BX79 667 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 HEMGNQ9BXL5 484 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 LHPPQ9H008 270 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 ZMYND12Q9H0C1 365 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 CLK4Q9HAZ1 481 aaKnown RBP4.81□□□□□ -1.64
CSDE1-212ENST00000529046 RGS18Q9NS28 235 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 TBC1D22BQ9NU19 505 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 IL36RNQ9UBH0 155 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 MTUS1Q9ULD2 1270 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 PADI3Q9ULW8 664 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 A4GNTQ9UNA3 340 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 CARD8Q9Y2G2 431 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 TRPV2Q9Y5S1 764 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 SCINQ9Y6U3 715 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 A3GALT2U3KPV4 340 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 TTC3P53804 2025 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 CACNA1IQ9P0X4 2223 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 RALGAPA2Q2PPJ7 1873 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 IGLV3-22A0A075B6J6 115 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 SMCO2A6NFE2 343 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 TNFRSF13BO14836 293 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-212ENST00000529046 ZBTB43O43298 467 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 MBTPS2O43462 519 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 TFP02787 698 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 PCNAP12004 261 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 SCG2P13521 617 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 IL9P15248 144 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 TNFAIP3P21580 790 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 CHATP28329 748 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 GNA11P29992 359 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 CTNNB1P35222 781 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 CCR9P51686 369 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 CRYBB1P53674 252 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-212ENST00000529046 NAPAP54920 295 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 EIF3BP55884 814 aaKnown RBP4.8□□□□□ -1.64
CSDE1-212ENST00000529046 HDAC4P56524 1084 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 TMPRSS3P57727 454 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 ABATP80404 500 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 SETQ01105 290 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-212ENST00000529046 HYAL1Q12794 435 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 GPS2Q13227 327 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 ITGB3BPQ13352 177 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-212ENST00000529046 KCNC3Q14003 757 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 ERV3-1Q14264 604 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 GPR18Q14330 331 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 HNF4GQ14541 408 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 UBE2SQ16763 222 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 SOWAHAQ2M3V2 549 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 ESCO2Q56NI9 601 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 PLEKHA7Q6IQ23 1121 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 GPAT4Q86UL3 456 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 SMRP1Q8NCR6 262 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 PPHLN1Q8NEY8 458 aaKnown RBP4.8□□□□□ -1.64
CSDE1-212ENST00000529046 METTL6Q8TCB7 284 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 ATP8B4Q8TF62 1192 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 SH3GLB2Q9NR46 395 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 NFE2L3Q9Y4A8 694 aa4.8□□□□□ -1.64
CSDE1-212ENST00000529046 COL4A4P53420 1690 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-212ENST00000529046 ITIH6Q6UXX5 1313 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 RPS10-NUDT3A0A1W2PQS6 291 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 LOC730098B7Z3J9 87 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 FAM86B1E9PN63 330 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 H3BQ06 376 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-212ENST00000529046 IFNL4K9M1U5 179 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 RPS6KA5O75582 802 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 SEC14L2O76054 403 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 CCNE2O96020 404 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 MT-CYBP00156 380 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-212ENST00000529046 FAM86B2P0C5J1 330 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 T-ENOLP0DO92 83 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 CAPN3P20807 821 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 MARK3P27448 753 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 TMOD1P28289 359 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 CD52P31358 61 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 SFNP31947 248 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 BSGP35613 385 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 COMPP49747 757 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-212ENST00000529046 RPL7AP62424 266 aaKnown RBP4.79□□□□□ -1.64
CSDE1-212ENST00000529046 SP4Q02446 784 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 GRIK3Q13003 919 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 MAPRE1Q15691 268 aaKnown RBP4.79□□□□□ -1.64
CSDE1-212ENST00000529046 DNTTIP2Q5QJE6 756 aaKnown RBP4.79□□□□□ -1.64
CSDE1-212ENST00000529046 MOXD1Q6UVY6 613 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 CENPQQ7L2Z9 268 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-212ENST00000529046 SLC46A3Q7Z3Q1 461 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 TBC1D1Q86TI0 1168 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms