RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	ARHGAP40	Q5TG30	622 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	ANKS6	Q68DC2	871 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	TTC27	Q6P3X3	843 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	AFTPH	Q6ULP2	937 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	C4orf22	Q6V702	233 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	PACS1	Q6VY07	963 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	ZNF534	Q76KX8	674 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	PRSS42	Q7Z5A4	293 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	CFAP206	Q8IYR0	622 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	SNRNP27	Q8WVK2	155 aa	Known RBP	11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	MS4A14	Q96JA4	679 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	CCNL2	Q96S94	520 aa	Predicted RBP	11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	CCM2	Q9BSQ5	444 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	KIR3DX1	Q9H7L2	352 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	COG4	Q9H9E3	785 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	HOMER3	Q9NSC5	361 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	SMARCAL1	Q9NZC9	954 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	EPHA6	Q9UF33	1036 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	RIMKLB	Q9ULI2	386 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	TTC7A	Q9ULT0	858 aa	Predicted RBP	11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	PRSS21	Q9Y6M0	314 aa		11.49	□□□□□ -0.57
PSMC3-205	ENST00000528362	ADAMTS20	P59510	1910 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	TCRBV7S3A2	A0A539	114 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	STMND1	H3BQB6	276 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362		K7ENP7	123 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	TOX3	O15405	576 aa	Predicted RBP	11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	SESN2	P58004	480 aa	Predicted RBP	11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	RAB15	P59190	212 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	CRADD	P78560	199 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	VAC14	Q08AM6	782 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	ITIH4	Q14624	930 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	PLCL1	Q15111	1095 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	TRIP13	Q15645	432 aa	Predicted RBP	11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	DCAF12	Q5T6F0	453 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	IRGC	Q6NXR0	463 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	INO80C	Q6PI98	192 aa	Predicted RBP	11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	VASH2	Q86V25	355 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	SLC35F6	Q8N357	371 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	COG1	Q8WTW3	980 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	ZDHHC12	Q96GR4	267 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	PBK	Q96KB5	322 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	UBL7	Q96S82	380 aa	Predicted RBP	11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	CTRC	Q99895	268 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	AP1M1	Q9BXS5	423 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	RAB33B	Q9H082	229 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	OR52A5	Q9H2C5	316 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	ZNF768	Q9H5H4	540 aa	Known RBP	11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	VPS37B	Q9H9H4	285 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	APMAP	Q9HDC9	416 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	CHRAC1	Q9NRG0	131 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	WDR70	Q9NW82	654 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	TRMT1	Q9NXH9	659 aa	Known RBP	11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	SLC24A2	Q9UI40	661 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	ATM	Q13315	3056 aa		11.48	□□□□□ -0.57
PSMC3-205	ENST00000528362	TEX51	A0A1B0GUA7	166 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	ZSCAN12	O43309	604 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	OR1I1	O60431	355 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	RASSF9	O75901	435 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	WT1	P19544	449 aa	Predicted RBP	11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	PDHA2	P29803	388 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	NSG1	P42857	185 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	MAGEA6	P43360	314 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	PREP	P48147	710 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	VPS41	P49754	854 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	SEPHS1	P49903	392 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	SH3BP2	P78314	561 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	RPA4	Q13156	261 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	SEMA3A	Q14563	771 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	GSE1	Q14687	1217 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	CYP1B1	Q16678	543 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	PCID2	Q5JVF3	399 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	CACHD1	Q5VU97	1274 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	PCSK4	Q6UW60	755 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	CCDC81	Q6ZN84	652 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	FAM92B	Q6ZTR7	304 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	NLRP9	Q7RTR0	991 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	PPHLN1	Q8NEY8	458 aa	Known RBP	11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	OR4L1	Q8NH43	312 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	ZFPM2	Q8WW38	1151 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	KLHL6	Q8WZ60	621 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	PEX13	Q92968	403 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	MAGOHB	Q96A72	148 aa	Known RBP	11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	SGSM3	Q96HU1	749 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	TEFM	Q96QE5	360 aa	Known RBP	11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	ASPSCR1	Q9BZE9	553 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	SPRY4	Q9C004	299 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	IL22	Q9GZX6	179 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	FBXO8	Q9NRD0	319 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	TREX1	Q9NSU2	369 aa		11.47	□□□□□ -0.57
PSMC3-205	ENST00000528362	KALRN	O60229	2985 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	IGHV5-51	A0A0C4DH38	117 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	OR6C74	A6NCV1	312 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	OR5K3	A6NET4	321 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	USP27X	A6NNY8	438 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	PGRMC1	O00264	195 aa	Known RBP	11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	GSTM1	P09488	218 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	TPSB2	P20231	275 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms