RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 DHFR2Q86XF0 187 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 RASAL3Q86YV0 1011 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ZDHHC13Q8IUH4 622 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 KATNAL2Q8IYT4 538 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 CHPFQ8IZ52 775 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 C8orf59Q8N0T1 100 aaPredicted RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 PDIK1LQ8N165 341 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 STX19Q8N4C7 294 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 PARP16Q8N5Y8 322 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 AMER2Q8N7J2 671 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ZNF366Q8N895 744 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 SLC37A3Q8NCC5 494 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 FBXO36Q8NEA4 188 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 TRPV3Q8NET8 790 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 DEPDC1BQ8WUY9 529 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ASB12Q8WXK4 309 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ELMO1Q92556 727 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 RORBQ92753 470 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 USP13Q92995 863 aaPredicted RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 TCEAL3Q969E4 200 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 CCDC74AQ96AQ1 378 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 PTERQ96BW5 349 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 BIRC7Q96CA5 298 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 NXPE2Q96DL1 559 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 RBM18Q96H35 190 aaKnown RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 PPP3R2Q96LZ3 170 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 KLHL15Q96M94 604 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 HS6ST2Q96MM7 605 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ZNF778Q96MU6 729 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 OR52B2Q96RD2 323 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 STRBPQ96SI9 672 aaKnown RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 SLC9A7Q96T83 725 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 RIT2Q99578 217 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 NPAS1Q99742 590 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 MND1Q9BWT6 205 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 FRMD8P1Q9BZ68 369 aaPredicted RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 TINAGL1Q9GZM7 467 aaPredicted RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 FAM49AQ9H0Q0 323 aaPredicted RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 MUC13Q9H3R2 512 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 FAM83DQ9H4H8 585 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 GAREM1Q9H706 876 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 C12orf49Q9H741 205 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ELP3Q9H9T3 547 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ATP13A1Q9HD20 1204 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 PAK6Q9NQU5 681 aaPredicted RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 INTS10Q9NVR2 710 aaKnown RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 MED9Q9NWA0 146 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 TAS2R14Q9NYV8 317 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ADA2Q9NZK5 511 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 CD274Q9NZQ7 290 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 BFARQ9NZS9 450 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ABCD2Q9UBJ2 740 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 OPTCQ9UBM4 332 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 NDRG3Q9UGV2 375 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 CHORDC1Q9UHD1 332 aaPredicted RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 RPS6KA6Q9UK32 745 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 PDE10AQ9Y233 779 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 PCDHGA7Q9Y5G6 932 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 PPP2R3BQ9Y5P8 575 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 COL14A1Q05707 1796 aaKnown RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 FER1L6Q2WGJ9 1857 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 TOGARAM1Q9Y4F4 1720 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 TECPR2O15040 1411 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ARFGEF2Q9Y6D5 1785 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 COL1A1P02452 1464 aaPredicted RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 ATP6AP2A0A1C7CYW4 349 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 SLC9B1P1A6NJY1 282 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 WDR64B1ANS9 1081 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 EIF1BO60739 113 aaKnown RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 IPO13O94829 963 aaKnown RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 SUPT7LO94864 414 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 APBB3O95704 486 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 HPRP00739 348 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 RPLP1P05386 114 aaKnown RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 S100A9P06702 114 aaKnown RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 GPIP06744 558 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 ITGAVP06756 1048 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 TPOP07202 933 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 DARSP14868 501 aaKnown RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 AKR1B1P15121 316 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 IL1R2P27930 398 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 ADORA2AP29274 412 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 TRHRP34981 398 aaPredicted RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 GGT5P36269 586 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 SPAM1P38567 509 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 EIF1P41567 113 aaKnown RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 KCNC1P48547 511 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 CCT3P49368 545 aaKnown RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 GP2P55259 537 aaKnown RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 CDH8P55286 799 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 CCNA1P78396 465 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 CHRNDQ07001 517 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 PUDPQ08623 228 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 STX5Q13190 355 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 MAB21L1Q13394 359 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 PEX6Q13608 980 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 KCNAB1Q14722 419 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 PCBP1Q15365 356 aaKnown RBP eCLIP5.73□□□□□ -1.49
CD44-225ENST00000527326 BAK1Q16611 211 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 LRRC26Q2I0M4 334 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms