RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 PTGER1P34995 402 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 NUP107P57740 925 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 YWHAZP63104 245 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 NME3Q13232 169 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 AAMPQ13685 434 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 LRP8Q14114 963 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 PLCL1Q15111 1095 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 SEPT7Q16181 437 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 C11orf91Q3C1V1 193 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 KRTCAP3Q53RY4 240 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 ZNF783Q6ZMS7 281 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 SV2BQ7L1I2 683 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 PHLDB2Q86SQ0 1253 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 GALNT13Q8IUC8 556 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 SHISA5Q8N114 240 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 LGI4Q8N135 537 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 MCUQ8NE86 351 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 OR11G2Q8NGC1 345 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 OR8K5Q8NH50 307 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 BRIX1Q8TDN6 353 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 HCAR2Q8TDS4 363 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 ECHDC3Q96DC8 303 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 DTD2Q96FN9 168 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 PERPQ96FX8 193 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 COX14Q96I36 57 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 MAGEB5Q9BZ81 275 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 STN1Q9H668 368 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 POPDC2Q9HBU9 364 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 SLC40A1Q9NP59 571 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 PTGFRNQ9P2B2 879 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 SLC23A2Q9UGH3 650 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 CDC42EP3Q9UKI2 254 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 CNOT6Q9ULM6 557 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 PADI2Q9Y2J8 665 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 HERC2O95714 4834 aa6.53□□□□□ -1.36
CTNNA1-216ENST00000519489 DYNC2H1Q8NCM8 4307 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 CCDC88CQ9P219 2028 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 SACSQ9NZJ4 4579 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 OR52A4PA6NMU1 304 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 M0QYV0 167 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 GRAP2O75791 330 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 TSPAN12O95859 305 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 SLC2A3P11169 496 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 VDRP11473 427 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 MMP11P24347 488 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 TEAD1P28347 426 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 SOX18P35713 384 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 GPD2P43304 727 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 PMPCAQ10713 525 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 TNK1Q13470 666 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 PDCD2Q16342 344 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 MIDNQ504T8 468 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 ATG9BQ674R7 924 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 KAZNQ674X7 775 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 DENND2CQ68D51 928 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 RAET1GQ6H3X3 334 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 CYB5D1Q6P9G0 228 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 ADAMTSL4Q6UY14 1074 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 USP45Q70EL2 814 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 SIRT6Q8N6T7 355 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 RASSF8Q8NHQ8 419 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 RND1Q92730 232 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 SCAMP4Q969E2 229 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 FRMD6Q96NE9 622 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 SMIM14Q96QK8 99 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 PANK2Q9BZ23 570 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 AMBRA1Q9C0C7 1298 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 RETREG1Q9H6L5 497 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 L2HGDHQ9H9P8 463 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 ZFYVE1Q9HBF4 777 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 GPATCH2LQ9NWQ4 482 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 ZFATQ9P243 1243 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 NEU3Q9UQ49 428 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 NPFFR2Q9Y5X5 522 aa6.52□□□□□ -1.37
CTNNA1-216ENST00000519489 CXorf51AA0A1B0GTR3 108 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 DYTNA2CJ06 578 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 ASPDHA6ND91 283 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 TMEM150CB9EJG8 249 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 E5RJQ4 531 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 TRAFD1O14545 582 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 PRRG2O14669 202 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 CD5LO43866 347 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 SMPD2O60906 423 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 SRGAP2O75044 1071 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 PMPCBO75439 489 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 ALX3O95076 343 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 IGSF6O95976 241 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 VIPP01282 170 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 HRGP04196 525 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 LONP1P36776 959 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 KPNA2P52292 529 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 RHOAP61586 193 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 CDK17Q00537 523 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 POU4F3Q15319 338 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 CNGA2Q16280 664 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 FILIP1LQ4L180 1135 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 FLYWCH1Q4VC44 716 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 DENND1BQ6P3S1 775 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 BRAT1Q6PJG6 821 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms