RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 ZFPM2Q8WW38 1151 aa8.17□□□□□ -1.1
CTNNA1-215ENST00000519309 CLIP3Q96DZ5 547 aa8.17□□□□□ -1.1
CTNNA1-215ENST00000519309 NAP1L5Q96NT1 182 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-215ENST00000519309 TRAPPC9Q96Q05 1148 aa8.17□□□□□ -1.1
CTNNA1-215ENST00000519309 TLR10Q9BXR5 811 aa8.17□□□□□ -1.1
CTNNA1-215ENST00000519309 TRIM7Q9C029 511 aa8.17□□□□□ -1.1
CTNNA1-215ENST00000519309 ZBTB20Q9HC78 741 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-215ENST00000519309 HAUS2Q9NVX0 235 aa8.17□□□□□ -1.1
CTNNA1-215ENST00000519309 SOHLH2Q9NX45 425 aa8.17□□□□□ -1.1
CTNNA1-215ENST00000519309 SNRNP200O75643 2136 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-215ENST00000519309 TMEM150CB9EJG8 249 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 GOLGA6L22H0YM25 854 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 MATN2O00339 956 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 MTX2O75431 263 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 CDK14O94921 469 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 HLA-DQB2P05538 268 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 MMP2P08253 660 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 HBQ1P09105 142 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 COX6B1P14854 86 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 CYP2A7P20853 494 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 CDK11BP21127 795 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 SSTR2P30874 369 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 ZNF165P49910 485 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 NIPAL4Q0D2K0 466 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 ZNF169Q14929 603 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 SMTNL2Q2TAL5 461 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 PTCHD3Q3KNS1 767 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 ZFYVE27Q5T4F4 411 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 ALS2CLQ60I27 953 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 ZNF324BQ6AW86 544 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 ACAD10Q6JQN1 1059 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 RPUSD3Q6P087 351 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 RPTNQ6XPR3 784 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 IRF2BP2Q7Z5L9 587 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 PPP1R32Q7Z5V6 425 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 TRAPPC5Q8IUR0 188 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 ZNF295-AS1Q8N0V1 137 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 TEKT4Q8WW24 435 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 NACC2Q96BF6 587 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 TSGA13Q96PP4 275 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 TRIB3Q96RU7 358 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 AGPAT1Q99943 283 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 PITPNM3Q9BZ71 974 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 XPO4Q9C0E2 1151 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 KIR3DX1Q9H7L2 352 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 ZFYVE1Q9HBF4 777 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 C1GALT1Q9NS00 363 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 SEPT11Q9NVA2 429 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 HRASLS2Q9NWW9 162 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 P4HTMQ9NXG6 502 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 SLC24A2Q9UI40 661 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 TMPRSS11EQ9UL52 423 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 DNHD1Q96M86 4753 aa8.16□□□□□ -1.1
CTNNA1-215ENST00000519309 LRRC53A6NM62 1247 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 E7EQ34 232 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 H3BMH7 237 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 PEX12O00623 359 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 PCDH17O14917 1159 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 MATN3O15232 486 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 CNOT3O75175 753 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 LCA5LO95447 670 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 UMODP07911 640 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 CD63P08962 238 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 CAPN3P20807 821 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 AGXTP21549 392 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 HTR1EP28566 365 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 FOLR3P41439 243 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 ITKQ08881 620 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 AIMP2Q13155 320 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 GTF2H3Q13889 308 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 INAQ16352 499 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 HIF1AQ16665 826 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 BOLA3Q53S33 107 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 MTFR2Q6P444 385 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 FAM180AQ6UWF9 173 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 FAM83HQ6ZRV2 1179 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 TMC3Q7Z5M5 1100 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 CDH24Q86UP0 819 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 AMZ2Q86W34 360 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 BCORP1Q8N888 145 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 FAM71BQ8TC56 605 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 PROKR1Q8TCW9 393 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 DTX3LQ8TDB6 740 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 C14orf79Q96F83 325 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 CCDC120Q96HB5 630 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 PPM1MQ96MI6 270 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 BPIFA3Q9BQP9 254 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 ADGRE3Q9BY15 652 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 ZCCHC2Q9C0B9 1178 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 MAGEE1Q9HCI5 957 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 PCDH18Q9HCL0 1135 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 SUCOQ9UBS9 1254 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 ITGB1BP2Q9UKP3 347 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 ZNF711Q9Y462 761 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 SCINQ9Y6U3 715 aa8.15□□□□□ -1.1
CTNNA1-215ENST00000519309 ACANP16112 2415 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 NSD1Q96L73 2696 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 A0A1B0GTH6 734 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 SYCE3A1L190 88 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms